Phage RBP Database

Genbank accession

YP_009613530.1 [GenBank]

Protein name

membrane protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,44

Seq2Symm

C3 confidence 0,998

C3	0,998
C1	0,027
C7-C9	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MPEGIYINYNDGRPAMQITAGLRAPSFCANFNQRCQSDKTLTINAPLTPGSQLIVIMTNPVEVLEVFDQTLVIPDPMYVTSVTRNGDSGVTLRGADGLGAYSGLPQWSGVVMELLPVGTRNEGLFVANSTDFTAISNAAFLMTCQYSQYVWVNGSMPLPVGGVPFARWNDPNVSVGFDGSNIIVRNAAYGGIDDVAASVGMELVIFNNTPPQPGNGITMTNSAGQVTFSTVKKPFVFNGTVDLSAGWQNIGNSLIQLAYTGTIIENNGGYNHIRMNGIRMADNVVGAARNRVVGNYSRRQFQMPGRNVVISTPLMTIPNMY

Physico‐chemical properties

protein length:	321 AA
molecular weight:	34520,86640 Da
isoelectric point:	5,41348
aromaticity:	0,08723
hydropathy:	0,01277

Domain architecture

YP_009613530.1

1 321 aa

STR 4–297 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR045604
STR

IPR045604

IPR011050
STR

IPR011050

YP_009613530.1

1321 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR045604	STR	DC_0402	4	297	InterPro cluster	Protein of unknown function DUF6453	Central	Low	Positional only	177 proteins / 177 hits
IPR011050	STR	IPR011050	71	282	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Phage

Salmonella phage SE1 (in:Nonagvirus) [NCBI] · taxon 2115848

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Salmonella enteritidis [NCBI] · taxon 149539

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

YP_009613530.1 [NCBI]

Genbank nucleotide accession

NC_042025 [NCBI]

CDS location

range 1 -> 60030
strand +

CDS

ATGCCAGAGGGTATTTATATAAACTACAATGACGGCAGACCTGCAATGCAAATAACAGCAGGATTACGCGCCCCGTCCTTTTGCGCTAACTTCAATCAACGCTGTCAATCCGATAAGACGCTAACCATCAACGCACCTTTAACGCCGGGATCGCAGCTTATCGTTATTATGACTAACCCTGTTGAAGTATTAGAAGTATTTGATCAGACGCTAGTCATCCCGGATCCAATGTATGTGACGTCCGTAACTCGAAACGGTGACAGTGGTGTGACGTTGCGAGGCGCAGATGGTCTTGGTGCTTATAGTGGATTGCCGCAATGGTCAGGGGTGGTTATGGAACTGCTACCTGTAGGAACGCGAAATGAGGGTCTATTTGTGGCTAACTCCACGGACTTCACAGCAATATCCAACGCAGCTTTTCTCATGACTTGTCAGTATTCCCAGTACGTATGGGTCAACGGTAGTATGCCATTACCTGTTGGTGGTGTTCCGTTTGCTCGCTGGAACGATCCTAACGTGTCAGTAGGTTTTGATGGTTCGAATATTATCGTTCGCAACGCAGCATATGGTGGAATCGATGACGTAGCGGCTTCTGTTGGAATGGAGTTAGTAATATTTAACAACACTCCCCCACAGCCCGGTAATGGTATTACCATGACGAACAGCGCTGGCCAAGTTACGTTCTCCACGGTTAAGAAGCCTTTTGTATTTAACGGAACAGTAGATCTTAGCGCGGGCTGGCAAAATATTGGTAACAGCTTAATACAGCTTGCATACACAGGTACAATTATTGAGAACAACGGAGGTTATAATCATATTCGCATGAACGGCATTCGCATGGCAGATAATGTGGTGGGTGCTGCAAGAAACCGCGTGGTAGGCAACTACTCTCGACGACAATTCCAAATGCCCGGTCGAAACGTGGTGATCTCAACACCACTCATGACTATACCAAATATGTATTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)