Phage RBP Database

Genbank accession

QQO40061.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,50

Protein sequence

MDLSYLENALNNGDFKEQVYSSLEGIYQISKLVNQLEILNNFSEQDLKIITETIQAIKSKLAVYESNEQELKAKIDALVSAIEAKEQELEARLNLELQKATTIEIAKLNEAGNELKTNLITPLTHAKNTLALELEKLKTATETLLNTPRMQGVNLRFVGIYVYGRQSLLKNESDEFRELFEFSSITLKNNKSYIVQFSMPYELKTNGLYSESMGEMVLCLKANNKVYPIINSFYQNKTANLVNNKIISTYLVISPFKTPSEEADYKIALFARKHIDLWVNVNYTDNTEGFETDFLNNAKFANHTTQSIPTDYNNDWVFYKHSQALVYEIL

Physico‐chemical properties

protein length:	330 AA
molecular weight:	37826,47530 Da
isoelectric point:	5,12195
aromaticity:	0,10000
hydropathy:	-0,33545

Domain architecture

QQO40061.1

1 330 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil

QQO40061.1

1330 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0415
STR

DC_0415

QQO40061.1

1330 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	54	99	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Helicobacter phage COL 5-PUJ [NCBI] · taxon 2801367

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Helicobacter pylori [NCBI] · taxon 210

cellular organisms Bacteria Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales

Genbank protein accession

QQO40061.1 [NCBI]

Genbank nucleotide accession

MW247144.1 [NCBI]

CDS location

range 20388 -> 21380
strand +

CDS

ATGGATTTGAGTTATTTAGAAAACGCCTTGAATAATGGCGATTTCAAAGAGCAGGTGTATAGCAGTTTAGAGGGGATTTATCAGATATCAAAGCTTGTGAATCAGTTAGAGATTTTGAATAACTTTAGCGAACAAGATTTGAAAATTATAACTGAAACGATACAAGCCATTAAAAGCAAGTTAGCGGTCTATGAAAGCAACGAACAGGAACTAAAGGCTAAAATAGACGCTTTAGTGAGCGCCATAGAAGCTAAAGAGCAAGAATTAGAAGCGCGCTTGAATTTAGAATTACAAAAAGCCACCACGATCGAAATAGCAAAGCTAAACGAAGCAGGAAACGAACTAAAAACTAATCTAATAACTCCACTCACTCACGCTAAAAACACTCTAGCGTTGGAATTAGAAAAGTTGAAAACAGCCACAGAAACGCTACTAAACACGCCAAGAATGCAAGGCGTTAATTTGAGGTTTGTAGGAATTTATGTTTATGGGCGTCAGAGTCTTTTGAAAAACGAAAGCGATGAATTTAGGGAATTGTTTGAATTTTCTAGTATCACGCTAAAAAATAATAAAAGCTATATCGTGCAATTTAGCATGCCTTATGAATTAAAAACTAACGGGCTTTATAGCGAGAGCATGGGGGAAATGGTGTTATGCTTGAAAGCGAATAATAAGGTCTATCCGATCATCAATAGCTTTTACCAAAACAAAACCGCTAATTTAGTAAATAATAAAATCATAAGCACTTATTTAGTGATTAGCCCGTTCAAAACGCCAAGCGAAGAAGCCGACTATAAAATAGCGTTATTCGCTAGGAAGCATATAGATTTGTGGGTGAATGTGAATTATACCGATAATACAGAAGGTTTTGAAACGGACTTTTTGAATAACGCCAAATTTGCTAACCACACCACGCAAAGCATTCCAACAGATTATAATAACGACTGGGTGTTTTATAAGCATTCTCAAGCGTTAGTTTATGAAATTTTATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)