Protein

View in Explore
Genbank accession
YP_009798892.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C1 confidence 0,999
C1 0,999
C3 0,444
D3 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MNKYYVDPSVSTNGIGTIESPFNSIDNAIAAGIQHPFTLHLKAGTVSKFSYSNNTTNSFFNNKTTVQSVITRYGVGKKPILTSDNNVRILDAWVCQLKLEDLQVSPMPGSERTAIYFNVVPIGNKSNQNICNFTLNRIDFIGTPESIAGSNGKSRVFCLNALADYGGSTNVAHKILVSNCRFDMLNAGIQIRGNPRLSDTTTYHGDQMKSYGVRVINCSFTNIINSSVFLGWCASKNQSRDVINDDMESGVDGIYHSSYRYNVYDLVTKTAAADVPVWFSGARYLTFQNFEIHGAGPGYPDRQSFDFDYHCHYCLARYGFTSNNARGPMFIQGPFSNSWYSSQGYTPLSSDIYTLYFTLGFGCIGNVIEYVVSYNDGVGRTNRSSDTYWIKTAAYRYVYDCLVRNCVFIDTVSSGNEWVIDVNPQADDSPTALSMTIDSCLFYWSNRTGTDVISSATVARIGDLFAKFKLKNNLFFSEKWGGATPTFTKILTENNKFVSPKFKNGVQMATPAGIREVKELVRLMSTSPCISSGSPNANLDIWGNAGSNIGWEQS
Physico‐chemical
properties
protein length:554 AA
molecular weight: 61348,07300 Da
isoelectric point:7,85646
aromaticity:0,12455
hydropathy:-0,23032

Domains

View on InterPro
Domain architecture
YP_009798892.1
1 554 aa
STR 1–551 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009798892.1
1 554 aa
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,7215
Central domain 13 495 484 0,9632
C-terminal 496 554 58 0,9268
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Klebsiella phage vB_KpnM_KpS110 [NCBI] · taxon 2079262
Uroviricota Caudoviricetes Pantevenvirales Taipeivirus Taipeivirus KpS110
Host
Klebsiella pneumoniae [NCBI] · taxon 573
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_009798892.1 [NCBI]
Genbank nucleotide accession
NC_047932 [NCBI]
CDS location
range 85540 -> 87204
strand +
CDS
ATGAACAAGTATTATGTAGATCCAAGTGTAAGCACTAATGGAATCGGGACTATCGAAAGCCCGTTCAATTCGATTGACAATGCTATTGCTGCTGGAATTCAGCATCCTTTTACGCTGCATCTAAAGGCTGGAACAGTTTCCAAATTCAGCTATTCAAATAACACGACGAACAGTTTCTTCAACAATAAGACTACTGTTCAATCTGTAATCACAAGGTACGGCGTTGGTAAAAAGCCGATCCTTACCAGCGACAACAACGTGAGGATACTTGACGCTTGGGTGTGCCAACTAAAGCTGGAGGATTTGCAGGTTTCTCCTATGCCGGGTTCTGAGCGAACTGCAATATATTTTAACGTTGTTCCGATTGGTAACAAGAGTAACCAAAATATATGCAACTTTACTTTGAACCGAATCGATTTTATCGGGACGCCAGAAAGCATCGCTGGCAGCAACGGCAAGTCCAGAGTATTTTGCCTGAACGCGCTTGCTGACTATGGTGGCAGCACTAACGTGGCTCATAAAATACTTGTCAGTAATTGCCGATTCGATATGTTGAACGCTGGTATACAGATCCGCGGGAATCCTCGCCTGAGCGACACGACGACTTACCATGGCGATCAAATGAAAAGCTATGGTGTGCGCGTGATCAATTGCAGCTTCACGAACATCATAAACTCAAGCGTTTTCTTAGGGTGGTGCGCGAGCAAAAACCAATCTAGAGATGTTATCAACGATGATATGGAAAGCGGAGTTGATGGTATTTACCACTCGAGCTATCGCTATAATGTCTATGATTTAGTCACGAAAACAGCAGCGGCAGATGTTCCTGTGTGGTTTAGTGGGGCGAGGTATCTGACGTTCCAAAACTTTGAGATCCATGGCGCTGGGCCTGGCTACCCTGATCGCCAGAGCTTCGACTTTGATTATCATTGCCACTATTGTCTGGCCCGCTACGGATTTACATCGAATAATGCCAGAGGACCGATGTTCATCCAAGGACCATTCAGTAACAGCTGGTATAGCTCGCAGGGGTATACCCCACTCTCCAGCGATATTTACACGCTGTATTTCACTCTAGGATTTGGGTGTATCGGCAATGTAATAGAATATGTTGTTTCTTACAACGACGGGGTGGGGCGAACTAACCGATCTTCTGATACGTACTGGATTAAAACAGCTGCTTATCGTTATGTTTATGACTGTCTAGTCCGAAATTGTGTTTTCATTGATACTGTGAGCAGTGGGAACGAATGGGTTATTGATGTTAACCCACAAGCTGACGACAGCCCTACCGCATTGTCGATGACAATTGATAGCTGCCTATTCTATTGGAGCAACAGGACGGGAACGGACGTAATCAGCAGTGCAACGGTGGCTAGAATCGGGGATCTTTTTGCTAAGTTTAAGCTGAAAAACAACCTGTTCTTCTCCGAGAAATGGGGTGGTGCTACTCCGACATTTACCAAGATACTCACCGAAAATAATAAATTCGTTTCTCCGAAATTTAAGAACGGGGTACAAATGGCAACGCCTGCTGGTATCCGCGAAGTGAAAGAATTAGTAAGATTGATGAGCACTTCGCCATGTATATCTAGTGGCTCTCCCAACGCTAACCTCGATATCTGGGGCAATGCTGGCTCTAATATAGGGTGGGAGCAAAGTTGA

Genome Context

Tertiary structure

YP_009798892.1
ESMFold structure
Source ESMFold
pLDDT 71.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella pneumoniae bacteriophage vB_KpnM_KpS110 Verevkin,V.V., Solovieva,E.V., Krasilnikova,V.M., Kislichkina,A.A. and Volozhantsev,N.V. 2023-05-17 — GenBank