Protein

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Genbank accession
YP_009798892.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNKYYVDPSVSTNGIGTIESPFNSIDNAIAAGIQHPFTLHLKAGTVSKFSYSNNTTNSFFNNKTTVQSVITRYGVGKKPILTSDNNVRILDAWVCQLKLEDLQVSPMPGSERTAIYFNVVPIGNKSNQNICNFTLNRIDFIGTPESIAGSNGKSRVFCLNALADYGGSTNVAHKILVSNCRFDMLNAGIQIRGNPRLSDTTTYHGDQMKSYGVRVINCSFTNIINSSVFLGWCASKNQSRDVINDDMESGVDGIYHSSYRYNVYDLVTKTAAADVPVWFSGARYLTFQNFEIHGAGPGYPDRQSFDFDYHCHYCLARYGFTSNNARGPMFIQGPFSNSWYSSQGYTPLSSDIYTLYFTLGFGCIGNVIEYVVSYNDGVGRTNRSSDTYWIKTAAYRYVYDCLVRNCVFIDTVSSGNEWVIDVNPQADDSPTALSMTIDSCLFYWSNRTGTDVISSATVARIGDLFAKFKLKNNLFFSEKWGGATPTFTKILTENNKFVSPKFKNGVQMATPAGIREVKELVRLMSTSPCISSGSPNANLDIWGNAGSNIGWEQS
Physico‐chemical
properties
protein length:554 AA
molecular weight: 61348,07300 Da
isoelectric point:7,85646
aromaticity:0,12455
hydropathy:-0,23032

Domains

Domains [InterPro]
IPR012334
STR
1–551
IPR012334
DC_1961
STR
1–553
DC_1961
IPR011050
STR
4–533
IPR011050
YP_009798892.1
1 554
Architecture
STR
STR 1-553 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009798892.1
1 554
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,7215
Central domain 13 495 484 0,9632
C-terminal 496 554 58 0,9268
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-495
C-terminal
496-554

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_KpS110
[NCBI] 		2079262 Uroviricota > Caudoviricetes > Pantevenvirales > Taipeivirus > Taipeivirus KpS110
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009798892.1 [NCBI]
Genbank nucleotide accession
NC_047932 [NCBI]
CDS location
range 85540 -> 87204
strand +
CDS
ATGAACAAGTATTATGTAGATCCAAGTGTAAGCACTAATGGAATCGGGACTATCGAAAGCCCGTTCAATTCGATTGACAATGCTATTGCTGCTGGAATTCAGCATCCTTTTACGCTGCATCTAAAGGCTGGAACAGTTTCCAAATTCAGCTATTCAAATAACACGACGAACAGTTTCTTCAACAATAAGACTACTGTTCAATCTGTAATCACAAGGTACGGCGTTGGTAAAAAGCCGATCCTTACCAGCGACAACAACGTGAGGATACTTGACGCTTGGGTGTGCCAACTAAAGCTGGAGGATTTGCAGGTTTCTCCTATGCCGGGTTCTGAGCGAACTGCAATATATTTTAACGTTGTTCCGATTGGTAACAAGAGTAACCAAAATATATGCAACTTTACTTTGAACCGAATCGATTTTATCGGGACGCCAGAAAGCATCGCTGGCAGCAACGGCAAGTCCAGAGTATTTTGCCTGAACGCGCTTGCTGACTATGGTGGCAGCACTAACGTGGCTCATAAAATACTTGTCAGTAATTGCCGATTCGATATGTTGAACGCTGGTATACAGATCCGCGGGAATCCTCGCCTGAGCGACACGACGACTTACCATGGCGATCAAATGAAAAGCTATGGTGTGCGCGTGATCAATTGCAGCTTCACGAACATCATAAACTCAAGCGTTTTCTTAGGGTGGTGCGCGAGCAAAAACCAATCTAGAGATGTTATCAACGATGATATGGAAAGCGGAGTTGATGGTATTTACCACTCGAGCTATCGCTATAATGTCTATGATTTAGTCACGAAAACAGCAGCGGCAGATGTTCCTGTGTGGTTTAGTGGGGCGAGGTATCTGACGTTCCAAAACTTTGAGATCCATGGCGCTGGGCCTGGCTACCCTGATCGCCAGAGCTTCGACTTTGATTATCATTGCCACTATTGTCTGGCCCGCTACGGATTTACATCGAATAATGCCAGAGGACCGATGTTCATCCAAGGACCATTCAGTAACAGCTGGTATAGCTCGCAGGGGTATACCCCACTCTCCAGCGATATTTACACGCTGTATTTCACTCTAGGATTTGGGTGTATCGGCAATGTAATAGAATATGTTGTTTCTTACAACGACGGGGTGGGGCGAACTAACCGATCTTCTGATACGTACTGGATTAAAACAGCTGCTTATCGTTATGTTTATGACTGTCTAGTCCGAAATTGTGTTTTCATTGATACTGTGAGCAGTGGGAACGAATGGGTTATTGATGTTAACCCACAAGCTGACGACAGCCCTACCGCATTGTCGATGACAATTGATAGCTGCCTATTCTATTGGAGCAACAGGACGGGAACGGACGTAATCAGCAGTGCAACGGTGGCTAGAATCGGGGATCTTTTTGCTAAGTTTAAGCTGAAAAACAACCTGTTCTTCTCCGAGAAATGGGGTGGTGCTACTCCGACATTTACCAAGATACTCACCGAAAATAATAAATTCGTTTCTCCGAAATTTAAGAACGGGGTACAAATGGCAACGCCTGCTGGTATCCGCGAAGTGAAAGAATTAGTAAGATTGATGAGCACTTCGCCATGTATATCTAGTGGCTCTCCCAACGCTAACCTCGATATCTGGGGCAATGCTGGCTCTAATATAGGGTGGGAGCAAAGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
963492a314c91e56b67f68eb812a44cfd11ac07bc31a003873c3f87a7cfaea6f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella pneumoniae bacteriophage vB_KpnM_KpS110 Verevkin,V.V., Solovieva,E.V., Krasilnikova,V.M., Kislichkina,A.A. and Volozhantsev,N.V. 2023-05-17 — GenBank