Protein

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Genbank accession
YP_009794731.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Seq2Symm
C2 confidence 0,077
C2 0,077
D3 0,024
D6-D12 0,024
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTNKITVTQALTEVKKLDKQISKLSQAGGFIGAYTNGKLPAGFSSKEQLVAEVTGNLQRIDALMARRANIKAKITESNAKTPVVVGKITMTVAEAIERKDSIQLSVDLMGVLKKELATTQKAQDDFNRRIQQDIDTKVTQILGNVKKVDANDDTYKMIKEQVEKANTFTLVDPNNLRVVIQKLEDQIEDFKLNVDVALSIVNATTFIELAE
Physico‐chemical
properties
protein length:211 AA
molecular weight: 23322,59880 Da
isoelectric point:8,62937
aromaticity:0,03791
hydropathy:-0,26066

Domains

View on InterPro
Domain architecture
YP_009794731.1
1 211 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Vibrio phage JSF12 [NCBI] · taxon 1983595
Uroviricota Caudoviricetes Demerecviridae Jesfedecavirus Jesfedecavirus JSF12
Host
Vibrio cholerae [NCBI] · taxon 666
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
YP_009794731.1 [NCBI]
Genbank nucleotide accession
NC_047882.1 [NCBI]
CDS location
range 26126 -> 26761
strand +
CDS
ATGACAAACAAGATTACAGTAACTCAAGCCCTGACTGAAGTTAAGAAGCTAGACAAGCAGATCTCCAAATTATCTCAGGCAGGGGGTTTTATCGGTGCTTACACTAATGGTAAGCTACCAGCAGGTTTCTCTTCAAAAGAGCAGCTAGTAGCTGAGGTTACTGGAAACCTGCAACGTATCGACGCTTTGATGGCTCGTCGGGCTAATATCAAAGCTAAGATCACTGAATCCAACGCGAAAACTCCAGTAGTCGTTGGTAAGATCACTATGACTGTAGCGGAAGCAATTGAGCGCAAGGACTCTATTCAGCTGTCGGTAGACCTTATGGGAGTGCTGAAGAAAGAGTTGGCAACAACTCAGAAAGCGCAAGACGACTTTAACCGTCGCATCCAACAAGACATTGACACCAAGGTTACACAAATCCTTGGCAATGTCAAGAAAGTCGATGCTAACGACGACACTTACAAGATGATTAAGGAGCAAGTAGAGAAGGCAAACACCTTCACGCTTGTAGACCCTAACAACTTGCGTGTAGTAATTCAAAAGCTTGAAGACCAGATCGAAGACTTCAAGCTTAACGTGGACGTAGCGCTATCCATTGTGAACGCTACTACGTTCATCGAACTAGCAGAATAA

Genome Context

Tertiary structure

YP_009794731.1
ESMFold structure
Source ESMFold
pLDDT 95.1
Oligomeric state monomer
Download structure