Protein

View in Explore
Genbank accession
WKM80518.1 [GenBank]
Protein name
tailspike1
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MSRNVEEIFGAVVTAPHQIPYTYTATGGETFISLPFYPVTGFITINGGVQVPVDNYEIDGNTVNLGRALEADDVVYCLFDKILSPEDYENGIRIYKFQAVGNETSFTPDFTTYGVQTLYIDGKFQVPGVDYNYNSATGVVSFLNGSPTAGVWVVAEMSIKQNYLALSSDSGASLVGTSSGNTVQEVLNSHSGSFQTGVKLLSSNDLIVDKSVTPNQLYRWDGAFPKSVPPGSTPASTGGVGSGAWLSVGDATLRSDLKSSQDNLGDELVTVKQPGTGTVSRTVHDKMAERYTFEDFGAKGDWFTDDTDALNAAALFSQTTGNTIYGCAQKGYRFTSGIQLVNQTTNVSAKFEGAGRERCFLLPVGSMDAAIKIWGTGWGASGQGAVFGAVFKGFEIRANGLTGNALDIRRAGLWCDFSDLRITDPNGIGLYHEAIFDHSYRDIEVRSATGLGIKTYEPKPTDAQGFQENSFLEFHNVNVLSSNGKTTQWEIDGGDAFSFYKCKPSEGTLGIDIKGIAKGFTFYQTYCDGQTDNATIENIGIKVASGCHEINVYGGRFWNTKYAIDQGAGGCSIKGVNIAYDSPAGATVYHFLARNSIDRPLDFDPYMSIFNEGGVPNFYTYRAVDANQHSYTPTLSNVNIGSGFTFGAYNKFGNKTRVFVHTELGAGSSITGAIAITAPHISSVTSFVSGTLFDASDNKSYPIQGYIKSGEQGMTLTHSGGLVTDTLPFPLSAGDMIHLDGEYWS
Physico‐chemical
properties
protein length:745 AA
molecular weight: 80028,78550 Da
isoelectric point:4,87971
aromaticity:0,11678
hydropathy:-0,18966

Domains

Domains [InterPro]
IPR040775
185–250
IPR040775 IPR011050
G3DSA:2.10.10.80
190–248
G3DSA:2.10.10.80 IPR012334
WKM80518.1
1 745
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SW16-7
[NCBI] 		3062021 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKM80518.1 [NCBI]
Genbank nucleotide accession
OR228402 [NCBI]
CDS location
range 136161 -> 138398
strand -
CDS
ATGTCTAGAAATGTCGAAGAAATCTTTGGAGCGGTTGTAACAGCACCACACCAGATTCCATACACTTATACCGCAACTGGCGGAGAGACGTTTATCTCCCTCCCGTTCTACCCTGTTACAGGCTTCATCACCATCAATGGTGGAGTTCAAGTTCCTGTTGACAACTATGAAATCGATGGTAACACAGTCAACCTCGGTCGAGCGCTAGAGGCTGATGATGTAGTGTACTGTCTGTTTGACAAGATCCTGTCCCCAGAAGATTATGAAAACGGGATTCGAATCTACAAGTTTCAGGCTGTAGGTAACGAAACTTCCTTCACACCCGACTTCACCACATATGGCGTGCAGACCCTGTATATCGATGGTAAGTTCCAGGTTCCTGGGGTTGACTACAATTACAACAGCGCGACTGGTGTGGTGTCATTCCTGAATGGATCTCCGACTGCTGGTGTTTGGGTTGTGGCTGAGATGTCCATTAAACAGAATTACCTGGCGCTCTCTTCCGATAGTGGAGCCAGCTTGGTGGGGACTTCTTCAGGTAACACCGTTCAAGAAGTTCTTAATTCACATTCTGGCTCTTTCCAGACTGGGGTAAAACTCCTTAGTTCTAATGACTTAATCGTGGATAAGTCTGTTACTCCGAACCAACTTTATCGTTGGGATGGGGCGTTTCCTAAATCAGTACCACCAGGGTCAACACCTGCTTCAACAGGTGGTGTAGGCTCAGGTGCATGGTTGAGTGTTGGTGATGCAACTCTTAGAAGTGATCTTAAAAGTTCTCAAGATAATCTTGGAGATGAACTGGTAACTGTAAAACAACCAGGCACTGGAACTGTATCCAGAACGGTTCACGATAAGATGGCTGAACGATACACATTCGAGGATTTTGGCGCGAAAGGTGACTGGTTTACTGATGATACAGATGCGTTAAATGCTGCCGCGCTGTTCTCGCAGACAACAGGCAATACTATTTACGGTTGCGCCCAAAAGGGATACAGATTCACTTCTGGCATTCAATTAGTAAATCAAACAACCAACGTCTCGGCAAAATTCGAGGGTGCTGGACGTGAGCGTTGTTTCCTGTTGCCAGTGGGATCAATGGATGCCGCAATAAAAATTTGGGGGACTGGATGGGGTGCTTCTGGACAGGGTGCGGTGTTCGGGGCGGTGTTTAAAGGTTTCGAAATACGAGCTAATGGACTCACCGGGAACGCTCTGGATATCAGACGTGCAGGTTTGTGGTGTGATTTTTCAGATCTAAGGATAACAGACCCTAATGGAATAGGGTTGTACCACGAAGCCATCTTTGATCACAGTTACCGTGATATAGAAGTGCGTTCGGCAACTGGTTTGGGGATTAAAACCTATGAGCCTAAACCTACTGATGCACAGGGGTTTCAGGAGAATAGTTTCCTAGAGTTTCATAACGTCAACGTACTATCATCAAACGGAAAAACAACGCAATGGGAAATTGATGGTGGTGATGCGTTCAGTTTTTATAAATGCAAACCATCTGAAGGTACATTAGGAATCGATATAAAAGGAATTGCCAAGGGTTTTACTTTCTACCAGACATACTGTGATGGACAAACAGATAACGCCACTATAGAAAATATTGGTATTAAAGTTGCATCTGGGTGCCATGAGATTAACGTATATGGCGGTCGTTTCTGGAATACTAAATATGCTATAGACCAGGGCGCTGGCGGTTGTTCAATTAAAGGTGTAAACATCGCATATGATTCCCCGGCTGGTGCAACTGTTTACCATTTTCTCGCGAGAAATAGCATTGACCGCCCTCTTGATTTCGACCCATACATGAGTATCTTTAATGAAGGTGGCGTGCCAAACTTTTACACTTACCGCGCTGTTGACGCCAATCAACACAGTTACACTCCTACATTATCTAATGTTAACATAGGATCGGGTTTTACATTCGGCGCATACAATAAGTTCGGAAACAAAACAAGGGTTTTTGTTCACACTGAGTTGGGTGCTGGAAGTTCTATTACAGGAGCCATAGCTATTACGGCTCCACATATCTCGTCAGTAACATCCTTTGTTAGTGGTACTCTTTTTGATGCGTCTGACAATAAATCATATCCTATTCAGGGCTACATAAAATCAGGAGAGCAGGGCATGACGCTAACTCACTCAGGGGGGCTGGTAACAGATACACTACCTTTCCCACTGTCCGCTGGTGATATGATTCACCTTGACGGTGAATACTGGAGTTAA

Tertiary structure

PDB ID
088992796cccbbab57ef8d1adc2dc20ca80b5dae8e3960360678ab2557dac30c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7872
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
SW16-7, a novel Ackermannviridae bacteriophage with highly effective lytic activity targets Salmonella enterica serovar Weltevreden Xu,J., Li,J., Yan,Y. and Li,X. — — GenBank