Phage RBP Database

Genbank accession

YP_655320.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,84

Protein sequence

MAYFAMYDPAKPPGQRLAPEVRAEIAIVAPSGLNDGAVTTIKLDEGAVTEPKLGYGAVTSTKIAAGGVELVNMAPESVDTAQLVDDSVTDEKAGPGVMQCHDDAGNPVTFDFVPMTAEDYASLPTKAPNTLYGLTT

Physico‐chemical properties

protein length:	136 AA
molecular weight:	14102,70860 Da
isoelectric point:	4,18559
aromaticity:	0,05882
hydropathy:	-0,06471

Domain architecture

YP_655320.1

1 136 aa

RBD 111–132 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR056923
RBD

IPR056923

YP_655320.1

1136 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1383
STR

DC_1383

YP_655320.1

1136 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR056923	RBD	DC_0181	111	132	InterPro cluster	Minor tail protein gp31, C-terminal	C-terminal	High	Text match	208 proteins / 208 hits

Proteins with similar domain architecture

Phage

Mycobacterium phage Pipefish [NCBI] · taxon 373413

Uroviricota Caudoviricetes Bclasvirinae Pipefishvirus pipefish

Host

Mycobacterium [NCBI] · taxon 1763

cellular organisms Bacteria Bacillati Actinomycetota Actinomycetes Mycobacteriales

Host

Mycobacterium sp. [NCBI] · taxon 1785

cellular organisms Bacteria Bacillati Actinomycetota Actinomycetes Mycobacteriales

Genbank protein accession

YP_655320.1 [NCBI]

Genbank nucleotide accession

NC_008199.1 [NCBI]

CDS location

range 38995 -> 39405
strand +

CDS

GTGGCCTACTTCGCGATGTACGACCCTGCCAAGCCGCCGGGGCAGCGTCTCGCTCCGGAGGTCCGCGCCGAGATCGCCATCGTGGCACCGTCCGGCCTCAACGACGGCGCGGTGACGACGATCAAGCTGGACGAGGGCGCGGTGACGGAACCAAAGCTCGGATACGGCGCGGTGACCAGCACGAAGATCGCTGCCGGTGGCGTCGAACTCGTCAACATGGCTCCGGAGTCGGTCGACACCGCGCAACTGGTCGATGACTCGGTCACGGACGAGAAGGCCGGTCCCGGCGTGATGCAGTGCCACGACGACGCGGGCAACCCGGTCACCTTCGACTTCGTGCCGATGACGGCGGAGGACTACGCCTCCCTGCCCACCAAGGCCCCGAACACCCTCTACGGCCTGACGACCTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)