Phage RBP Database

Genbank accession

YP_655320.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,84

Seq2Symm

C3 confidence 0,991

C3	0,991
C1	0,040
C6	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAYFAMYDPAKPPGQRLAPEVRAEIAIVAPSGLNDGAVTTIKLDEGAVTEPKLGYGAVTSTKIAAGGVELVNMAPESVDTAQLVDDSVTDEKAGPGVMQCHDDAGNPVTFDFVPMTAEDYASLPTKAPNTLYGLTT

Physico‐chemical properties

protein length:	136 AA
molecular weight:	14102,70860 Da
isoelectric point:	4,18559
aromaticity:	0,05882
hydropathy:	-0,06471

Domain architecture

YP_655320.1

1 136 aa

RBD 111–132 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR056923
RBD

IPR056923

YP_655320.1

1136 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1383
STR

DC_1383

YP_655320.1

1136 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR056923	RBD	DC_0181	111	132	InterPro cluster	Minor tail protein gp31, C-terminal	C-terminal	High	Text match	208 proteins / 208 hits

Proteins with similar domain architecture

Phage

Mycobacterium phage Pipefish [NCBI] · taxon 373413

Uroviricota Caudoviricetes Pipefishvirus Pipefishvirus pipefish

Host

Mycobacterium [NCBI] · taxon 1763

Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium

Host

Mycobacterium sp. [NCBI] · taxon 1785

Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.

Genbank protein accession

YP_655320.1 [NCBI]

Genbank nucleotide accession

NC_008199.1 [NCBI]

CDS location

range 38995 -> 39405
strand +

CDS

GTGGCCTACTTCGCGATGTACGACCCTGCCAAGCCGCCGGGGCAGCGTCTCGCTCCGGAGGTCCGCGCCGAGATCGCCATCGTGGCACCGTCCGGCCTCAACGACGGCGCGGTGACGACGATCAAGCTGGACGAGGGCGCGGTGACGGAACCAAAGCTCGGATACGGCGCGGTGACCAGCACGAAGATCGCTGCCGGTGGCGTCGAACTCGTCAACATGGCTCCGGAGTCGGTCGACACCGCGCAACTGGTCGATGACTCGGTCACGGACGAGAAGGCCGGTCCCGGCGTGATGCAGTGCCACGACGACGCGGGCAACCCGGTCACCTTCGACTTCGTGCCGATGACGGCGGAGGACTACGCCTCCCTGCCCACCAAGGCCCCGAACACCCTCTACGGCCTGACGACCTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)