Phage RBP Database

Genbank accession

QIA28689.1 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 1,00

Seq2Symm

C3 confidence 0,997

C3	0,997
C1	0,080
C2	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MIGGNRMPEQYLFRDKMYQDLTDPTPKIIQDLDKATGQLTDLPKLSINLEEYKPDGTGVNDSLGALTKAIEKSSLLSKVTSAPVAIELPPGVYRFVKTSDIATPSLICRGGLATIVVEDPYAFIVSSNFMLANVKIISKNTYVKTATMFKPIFKSTVDVENITFDNVTFDSQLSAMDGTVRASQCVNLKAVTNLKLNNIVVKGYRHGFTADGLSKNIKGTKLHFENVELPLYMRGSSPAVTDENYATNIQFSHVSHINTQSQMNNYFKQAGADTFLMEKCDTITITDVISVYPVERTAYLSCCRNAVVNTWNLKNALGIKFVGGSNTATPVETIARNCKVSNVHAVFDDATMTQQGYVAEFYWAKDWSVKNSSITGNSVGSVLVSTMHYIENGLIEDCYGENLKRGFFEYSYVGDIDNPDPTPDIAAGNYTAGVKGLTIRKNTVKNSNTFGGGDGTGYEAIKLRDTAPPAAGTYRYQDIVVEENKIINPTDDYGMSAAGNYCKGLINIDAVKGLRVSNNTVIGHKRLDANSNPVTLPIQVGSNSKDVIVQHEETSRGYDMKFVWGTLYVSSDSKIIVNSIHRNMAIQDTATITVKHDQTNLKTTKDISTAFRISGRTSVSDATDFALPVVGYNLAGYTLPAVFGTVDVATDNGDVGGYTITKAGVIALKANSAAFYVTTVTNAQFALTKDATLPRYLMRYKTGASTNFVINYTINAV

Physico‐chemical properties

protein length:	717 AA
molecular weight:	78100,47330 Da
isoelectric point:	6,80320
aromaticity:	0,08787
hydropathy:	-0,16639

Domain architecture

QIA28689.1

1 717 aa

STR 45–529 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011050
STR

IPR011050

IPR011050
STR

IPR011050

QIA28689.1

1717 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011050	STR	IPR011050	45	529	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR011050	STR	IPR011050	55	529	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QIA28689.1

1 717 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	62	62	0,9709
Central domain	63	583	522	0,9901
C-terminal	584	717	133	0,9710

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Phage f2b1 [NCBI] · taxon 2708592

Uroviricota Caudoviricetes Herelleviridae Phage f2b1

Host

Staphylococcus aureus [NCBI] · taxon 1280

Bacillota Bacilli Caryophanales Staphylococcaceae Staphylococcus Staphylococcus aureus

Genbank protein accession

QIA28689.1 [NCBI]

Genbank nucleotide accession

MN940411.1 [NCBI]

CDS location

range 149074 -> 151227
strand +

CDS

ATGATAGGAGGTAATAGAATGCCAGAACAATATCTTTTTCGGGATAAGATGTACCAAGATTTAACTGACCCTACGCCTAAAATCATCCAAGACCTAGATAAAGCAACAGGGCAGTTAACCGATCTTCCCAAGTTATCAATTAACTTGGAAGAGTATAAGCCAGATGGTACAGGTGTAAATGATAGCCTAGGCGCTCTCACAAAGGCGATAGAAAAGTCTAGTCTGCTTAGTAAGGTAACTAGTGCCCCGGTAGCTATCGAGTTACCACCGGGAGTTTACCGCTTTGTAAAAACAAGCGATATAGCAACCCCATCCCTAATTTGTCGAGGAGGTCTTGCTACAATCGTAGTAGAAGACCCTTATGCGTTTATCGTTTCTTCTAACTTTATGCTAGCAAACGTTAAGATTATTTCAAAGAACACATACGTTAAAACTGCTACAATGTTTAAACCTATTTTTAAATCAACTGTAGACGTAGAAAACATTACTTTCGATAACGTTACTTTTGATTCTCAACTGTCTGCTATGGATGGTACGGTTCGTGCTAGTCAGTGCGTGAACTTAAAGGCTGTAACAAACTTAAAGCTAAACAACATTGTAGTAAAAGGGTATCGTCACGGCTTTACAGCAGACGGTCTTTCTAAGAATATTAAAGGTACTAAGCTGCACTTTGAAAATGTAGAATTACCTTTATATATGCGAGGAAGTAGCCCAGCAGTAACGGATGAGAACTATGCTACTAATATTCAGTTTTCCCATGTATCACATATCAATACACAGAGTCAAATGAATAACTACTTTAAGCAAGCGGGAGCGGATACCTTCCTAATGGAAAAGTGTGACACGATCACTATTACAGACGTTATATCTGTATACCCTGTAGAGCGCACAGCTTACTTATCTTGTTGTAGAAATGCTGTTGTTAACACTTGGAATCTGAAAAATGCTTTAGGTATTAAATTCGTAGGTGGGAGCAACACAGCTACTCCGGTAGAAACAATTGCTAGAAACTGTAAAGTATCAAATGTTCATGCTGTATTCGATGATGCTACCATGACTCAACAAGGTTACGTTGCAGAGTTTTATTGGGCAAAAGATTGGTCAGTTAAGAACTCATCTATTACAGGTAACAGCGTAGGCTCCGTTCTTGTGTCTACTATGCATTACATCGAGAATGGTTTAATTGAGGATTGTTACGGAGAGAACTTAAAGCGTGGTTTCTTCGAGTACTCCTATGTAGGAGACATCGACAACCCAGACCCAACCCCTGATATTGCAGCAGGAAACTATACAGCAGGTGTTAAGGGGCTTACTATTCGTAAAAATACGGTTAAGAACTCTAATACGTTTGGTGGAGGAGACGGAACAGGTTACGAAGCAATCAAACTTCGAGACACAGCACCTCCGGCTGCTGGTACGTATCGCTATCAAGATATTGTAGTAGAGGAAAATAAAATTATTAATCCTACAGATGATTATGGTATGTCTGCTGCTGGAAATTACTGTAAAGGGCTTATTAACATTGACGCTGTTAAAGGTTTACGTGTTAGCAATAACACTGTAATCGGACATAAGCGCTTAGATGCTAATAGCAACCCAGTTACTCTACCAATTCAAGTCGGGTCTAACTCTAAGGATGTCATTGTTCAGCATGAAGAAACATCCCGTGGGTACGATATGAAGTTTGTATGGGGTACTTTATATGTATCTTCTGACTCTAAGATCATAGTTAACTCTATTCACCGTAATATGGCAATCCAAGACACTGCTACTATTACAGTGAAGCACGATCAAACGAACCTGAAGACAACTAAAGATATTTCTACAGCCTTCCGTATCTCAGGTAGAACTAGTGTCTCAGACGCTACAGACTTTGCATTACCTGTTGTCGGCTATAACTTAGCAGGATACACACTGCCTGCTGTGTTTGGTACGGTAGATGTCGCTACAGATAACGGGGATGTAGGCGGGTATACGATCACTAAAGCAGGAGTTATAGCTCTCAAGGCAAACTCTGCTGCTTTCTATGTTACCACTGTCACTAATGCACAGTTTGCATTAACTAAAGACGCTACGTTACCTAGATACCTTATGCGATATAAAACAGGAGCTAGTACAAATTTTGTTATTAACTACACAATCAATGCAGTTTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)