Protein
View in Explore- Genbank accession
- QBP28418.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MIGEFSISDPAAMGGYFELSSLNLIGSQDSSDVLLLQGSQGQMKLERYDVKVLNPAGNGITEATTWETLHLLGFIRGPATGDGSCTGIGLNIKSDGTIGQINMKQYLLVNVMKMGYGIRAGRREKTNGTLGPLVFTGGQTSGADHHGMWLDGGVISFTSIGQQHEGCRKNGIRIDNILEDGVVSSDLARTIKFQQNYITGCGRIEDGSQDSYGVNIVNGDGIELDTLTFNEVGNGIAFDAANVDNLLIRRPHFRTVRAYGTSQGFGIRSFSDGVPQKRQYLEHPVFNQTPATQIDDKAREIFGRGAAGGRISFSTNTPTPSIIHGSGSGNESYRILNFNNTTATTITNITGGTPYQRLLITFSNDATTIQHSSNIVLRGGKDVQGTVGKTLELYYTGSFWQEVGDPVRALTGTSANRPFSTAFPGMEYFDTTLNKPIWRNAANNGWVDAAGNVV
- Physico‐chemical
properties -
protein length: 454 AA molecular weight: 48847,90980 Da isoelectric point: 5,93316 aromaticity: 0,08370 hydropathy: -0,29559
Domains
Domains [InterPro]
DC_0941
STR
50–454
STR
50–454
IPR057996
ENZ
337–401
ENZ
337–401
1
454
Architecture
STR 50-454
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
454
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0101 |
| Central domain | 11 | 310 | 301 | 0,9932 |
| C-terminal | 311 | 454 | 143 | 0,9886 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-310
11-310
C-terminal
311-454
311-454
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage ST101-KPC2phi6.1 [NCBI] |
2555909 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Klebsiella pneumoniae [NCBI] |
573 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QBP28418.1
[NCBI]
Genbank nucleotide accession
MK448231.1
[NCBI]
CDS location
range 46051 -> 47415
strand +
strand +
CDS
ATGATTGGAGAATTCAGTATTTCCGACCCGGCAGCAATGGGCGGGTATTTTGAACTGTCGTCATTGAACCTTATCGGCAGCCAGGACAGCTCAGATGTCCTTTTATTACAGGGCAGTCAGGGCCAGATGAAGCTGGAAAGATACGATGTAAAAGTGCTCAATCCAGCTGGTAACGGGATAACAGAAGCCACTACCTGGGAAACGCTTCATCTTCTTGGGTTTATACGTGGGCCAGCTACAGGAGATGGTTCATGTACCGGTATTGGTTTGAATATCAAATCTGATGGTACTATTGGTCAGATTAATATGAAGCAATATCTTCTCGTTAATGTGATGAAGATGGGATATGGCATCCGGGCGGGGCGTCGTGAAAAAACAAATGGAACTTTGGGCCCATTGGTGTTTACTGGTGGGCAAACTTCTGGTGCTGATCATCACGGGATGTGGCTGGATGGCGGGGTAATTTCTTTCACATCAATAGGTCAGCAGCATGAAGGATGTAGAAAAAATGGTATTAGAATAGATAATATACTTGAAGATGGGGTGGTAAGCTCTGATCTTGCACGTACCATTAAATTCCAGCAGAACTACATTACTGGCTGCGGCCGTATTGAGGATGGAAGTCAGGATAGTTATGGTGTAAATATTGTTAACGGCGATGGGATTGAACTGGATACTTTAACGTTTAATGAGGTGGGTAATGGAATCGCATTCGATGCCGCAAACGTAGATAACCTGTTAATTCGTCGCCCACATTTTCGCACTGTTCGAGCGTACGGAACATCTCAGGGCTTTGGTATCCGTTCATTCTCCGACGGAGTGCCGCAAAAACGTCAATACCTTGAACACCCGGTATTTAACCAAACTCCGGCCACACAGATTGATGATAAAGCCCGTGAAATATTTGGTCGCGGAGCGGCAGGAGGTCGAATCTCATTTTCGACAAACACACCGACGCCGAGTATTATTCACGGCTCAGGCTCAGGGAATGAGTCGTACCGCATCCTCAATTTTAACAACACGACAGCCACCACTATTACCAACATTACCGGAGGCACACCCTATCAGCGCCTGCTGATTACATTTTCAAACGATGCAACCACGATACAGCACAGTAGTAATATTGTTCTGCGTGGCGGTAAAGATGTTCAGGGGACGGTAGGGAAGACGCTGGAGCTGTACTACACGGGGTCATTCTGGCAAGAGGTGGGAGACCCGGTAAGAGCGCTCACTGGAACCAGCGCAAATCGACCATTCAGTACAGCGTTTCCCGGTATGGAATATTTCGATACCACGCTGAATAAACCCATCTGGCGTAATGCGGCCAATAACGGCTGGGTTGACGCGGCGGGTAATGTGGTCTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
abd69394acde5e017094a4db8a95cfca7524e0ab7950f863c4e5b11c5f91438f
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50