Protein

View in Explore
Genbank accession
YP_010670599.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,86
Seq2Symm
C1 confidence 0,344
C1 0,344
C3 0,294
I 0,035
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAITFPNTPSPGDQYVAENGYTYEYDGEKWSTLPDSEGQIPAGGTTGQFLAKVNNTDYNMEWTDAAPPTSIGTTPPTGDLEDGQLWWRSDTGVLYIYYGDGDSSQWVQAAVGMDTRVQAEVYTGDVPPLGPGEGDLWWNTTDTNLYVYYQSVWVQSNPVPPEQPNYWQRDAATGVVSPSTDGDVLNGIASINGGHAGPNNLIINGAMQVRQRTADIAVSQGLDQTTQGPIDRFRLRHHGDQWAGTLSRGTESVNNEFQHYWRLTTTTPETAVDGVNQLIVEQLFEGYNVAHLNYGNSPAKSLTLSFWVRSSEAGTYIAKLYSLDANRLITKVYTIDSADTWEQKTFVFEGDAAGTIGNNESEGLRVCWQIAAGTDFVSGSTPTTWTAYSNTTWAAGHVQNGVMTNTNATFDLTGVQLTATDTPVAFQHEDYGTTLQKCQRYFIRKTTASDYRVSILRSNSSSSSTVMSLPVQMRTTPTASVVTQPNVKSIRRLDDVNGTNYTNLTVDPRNNLEYSFTVDSAFTEVSQMLVFNAIFDLDAEL
Physico‐chemical
properties
protein length:541 AA
molecular weight: 59436,40150 Da
isoelectric point:4,41653
aromaticity:0,10536
hydropathy:-0,45157

Taxonomy

Phage
Synechococcus phage S-H34 [NCBI] · taxon 2718942
Uroviricota Caudoviricetes Pantevenvirales Makaravirus Makaravirus thirtyfour
Host
Synechococcus sp. MW02 [NCBI] · taxon 1620844
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Coding sequence (CDS)

Genbank protein accession
YP_010670599.1 [NCBI]
Genbank nucleotide accession
NC_070965 [NCBI]
CDS location
range 65733 -> 67358
strand -
CDS
ATGGCTATTACCTTCCCCAATACTCCATCACCTGGAGATCAATATGTAGCCGAGAACGGTTATACTTACGAGTATGACGGTGAGAAGTGGTCCACTCTGCCTGACAGTGAGGGCCAAATTCCTGCTGGTGGTACTACTGGTCAGTTCCTTGCTAAGGTAAACAACACTGACTATAACATGGAGTGGACTGATGCCGCTCCTCCTACCTCTATTGGTACCACTCCACCAACTGGGGACCTAGAAGACGGTCAGTTGTGGTGGCGTAGTGACACTGGTGTCCTTTATATTTACTACGGTGACGGCGACTCCTCCCAGTGGGTCCAGGCTGCTGTGGGTATGGATACTCGTGTCCAGGCTGAAGTTTATACCGGTGATGTTCCACCTCTGGGTCCAGGGGAAGGTGACCTGTGGTGGAACACTACCGATACCAACCTCTACGTCTATTACCAGAGCGTCTGGGTGCAGTCTAACCCTGTTCCCCCAGAGCAACCCAACTACTGGCAGAGAGACGCCGCTACGGGCGTCGTAAGCCCCTCTACGGATGGTGACGTCCTTAACGGCATTGCTTCTATTAACGGTGGCCATGCTGGTCCCAATAACCTCATCATCAACGGTGCCATGCAGGTCAGACAACGCACTGCTGATATTGCTGTCAGTCAAGGACTCGATCAAACAACACAGGGTCCAATTGACCGTTTTAGGTTAAGACATCATGGAGACCAATGGGCAGGAACTCTTTCTCGTGGTACCGAAAGCGTCAACAACGAATTTCAACACTACTGGAGATTAACAACAACGACTCCAGAGACAGCCGTAGACGGCGTAAACCAACTTATTGTAGAACAACTCTTTGAAGGATACAATGTTGCACATCTGAATTATGGTAATAGCCCAGCTAAATCATTAACACTTAGTTTTTGGGTTAGATCTTCTGAAGCTGGTACTTACATTGCTAAACTATATTCCCTCGACGCCAACAGGTTAATCACTAAAGTTTACACTATTGATTCTGCCGACACCTGGGAACAAAAAACTTTTGTGTTTGAGGGTGATGCTGCTGGTACTATTGGTAATAATGAGAGTGAAGGTTTACGAGTTTGTTGGCAGATTGCTGCAGGTACTGATTTTGTATCTGGTTCAACTCCAACAACATGGACTGCTTATTCTAACACAACCTGGGCCGCGGGGCACGTTCAGAATGGTGTTATGACTAATACTAATGCAACCTTTGACTTGACTGGTGTCCAACTAACCGCCACCGATACTCCTGTTGCCTTCCAACACGAAGACTACGGTACCACTCTCCAGAAGTGTCAGAGGTATTTCATACGCAAAACGACCGCATCAGATTACAGGGTTTCCATTCTCAGAAGCAACAGCAGTAGCAGCTCAACGGTAATGTCTTTACCTGTCCAGATGAGGACAACCCCAACGGCATCAGTAGTCACTCAACCAAACGTCAAATCGATTAGACGACTAGACGACGTTAACGGAACGAATTATACCAATCTAACTGTCGATCCGAGGAACAATTTGGAATATAGTTTTACTGTAGATTCTGCTTTCACCGAGGTTTCTCAAATGCTTGTGTTTAATGCAATCTTCGATCTCGACGCCGAACTCTGA

Genome Context

Tertiary structure

YP_010670599.1
ESMFold structure
Source ESMFold
pLDDT 84.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank