Protein

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Genbank accession
XUK81938.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MAVAYPTIPIPDLEDAETVLSDDFLVVNQTDGTRKAKIDDVVNDLSITKIVYFTEGGYLKSKKDFAYDPETKRYYTWNGDYPKIILPDSTVEGAGGVSAKAWSVFGELAATSSGRIVDYGSIGGQLDMDLEVADTFKVRLTSNTTISFENQTEGLEGVARTITVCITQTSGGNKVYWPDNVKWAYGRDPILTFTAGATDIFKLETYDNGLTWYGALIIAGAI
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24232,85470 Da
isoelectric point:4,40686
aromaticity:0,11261
hydropathy:-0,13468

Domains

Domains [InterPro]
DC_1864
STR
13–222
DC_1864
G3DSA:2.10.10.80
ATT
47–104
G3DSA:2.10.10.80
IPR040775
RBD
51–104
IPR040775
XUK81938.1
1 222
Architecture
STR
ATT
STR
STR 13-46 | ATT 47-104 | STR 105-222
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUK81938.1
1 222
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,7805
Central domain 207 211 6 0,0043
C-terminal 212 222 10 0,9807
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-211
C-terminal
212-222

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage NHEP1
[NCBI] 		3420447 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUK81938.1 [NCBI]
Genbank nucleotide accession
PQ511146.1 [NCBI]
CDS location
range 127678 -> 128346
strand -
CDS
ATGGCTGTAGCTTATCCTACAATACCAATCCCAGATCTTGAAGATGCAGAAACAGTCTTGAGTGATGACTTCTTGGTTGTCAACCAGACTGACGGGACAAGAAAGGCTAAGATTGATGATGTTGTCAATGATCTTAGCATTACTAAAATAGTTTATTTCACAGAGGGCGGTTATCTTAAGAGCAAGAAGGACTTTGCTTATGACCCAGAGACCAAGCGATACTACACGTGGAACGGGGATTACCCTAAAATAATCCTCCCAGACTCTACTGTAGAGGGTGCTGGGGGTGTGTCTGCAAAAGCCTGGTCTGTTTTTGGGGAGCTTGCTGCAACTTCTTCTGGCAGAATAGTTGATTACGGATCTATTGGTGGTCAGCTTGATATGGATCTTGAAGTTGCGGACACTTTTAAAGTTCGACTAACTTCAAATACCACAATCTCTTTTGAAAATCAGACAGAAGGTCTTGAAGGGGTAGCGAGAACTATAACCGTATGCATTACTCAGACCTCTGGCGGTAACAAAGTCTATTGGCCTGATAATGTTAAATGGGCATACGGAAGAGATCCTATCCTAACATTTACAGCTGGTGCAACAGATATTTTCAAGTTAGAAACCTACGACAACGGGCTAACTTGGTACGGGGCACTGATTATAGCAGGAGCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d68d7fa055411e3875e9790b121648c4c85b7ad9fce51133b23da9aaf7a1487e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9020
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50