Phage RBP Database

UniProt accession

A0A0M4S5A8 [UniProt]

Protein name

Short tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,91

TF

Evidence RBPdetect2

Probability 0,98

Protein sequence

MNNTINHVSDKSVYVTFDPAGTQWPSTFHNVQQALAAIGPWARTDVGLPNAAPGVRGIAAIATQAMIDAGTDTQTIVTPALLEYRLQNPHASQTVWGYTRYATDAESVTVTNDLVSLTPRSLNYVFNTRQAKENVWGSAKLSTTAQATSGTDDTTAMTPLKVKQAISALVPVQANATESSFGLVQLATVAEVRAGTIRDGFAISPYTFIRLTASESDLGLLRIATQAEVNAGTDNTKAITPQKLAAVKGSGSTFGMVKLTTDINTGLANTALSAGANVVPSNKNSAITGGALYQGSISADNKYQTKTDVDANIPIGCMMLAAFNADVGNLFICNGRAMNRNSNPELFARIGYTYGGSGDIFNLPDMRGLVARGFDGGRGVDTGRGFGTYQADMFAYHEHDLQMIYQNGGNLPKSQAVYELKGAEKNDQRVMHLNNDYSKALGTGGNETRMKNLAVNYVIRVR

Physico‐chemical properties

protein length:	462 AA
molecular weight:	49188,60310 Da
isoelectric point:	7,72501
aromaticity:	0,07359
hydropathy:	-0,21061

Domain architecture

A0A0M4S5A8

1 462 aa

ATT 302–370 · STR 371–461 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083

A0A0M4S5A8

1462 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0176
STR

DC_0176

A0A0M4S5A8

1462 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	302	367	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	304	461	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	316	370	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Proteins with similar domain architecture

Phage

Citrobacter phage Margaery [NCBI] · taxon 1701810

Uroviricota Caudoviricetes Pantevenvirales Pseudotevenvirus Pseudotevenvirus margaery

Host

Citrobacter [NCBI] · taxon 544

Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae

Host

Citrobacter sp. [NCBI] · taxon 1896336

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

ALF01895.1 [NCBI]

Genbank nucleotide accession

KT381880 [NCBI]

CDS location

range 118295 -> 119683
strand +

CDS

ATGAACAATACAATTAACCACGTAAGCGATAAATCCGTTTACGTGACATTTGATCCTGCTGGTACGCAATGGCCTAGCACGTTTCATAACGTACAACAGGCATTAGCCGCTATTGGGCCGTGGGCGCGTACTGATGTTGGTTTGCCTAATGCCGCGCCTGGTGTGCGCGGTATTGCTGCTATTGCGACACAGGCAATGATTGATGCGGGTACTGATACCCAGACGATCGTAACTCCGGCTCTGCTGGAATACCGTCTGCAAAACCCTCATGCATCACAAACCGTATGGGGTTACACCCGTTACGCAACTGATGCAGAATCAGTAACAGTAACAAACGATCTGGTTTCTCTTACTCCGCGCTCGTTGAACTATGTGTTTAACACCCGTCAGGCAAAAGAAAACGTTTGGGGTTCTGCGAAACTGTCAACAACTGCTCAGGCAACGTCTGGTACTGATGACACTACCGCAATGACTCCGCTTAAAGTGAAGCAAGCGATCTCTGCTCTGGTTCCGGTACAGGCAAACGCAACAGAAAGTTCGTTTGGTCTTGTTCAGTTAGCAACTGTTGCAGAAGTTCGCGCGGGTACTATTCGCGATGGGTTTGCAATTTCACCATACACGTTTATTCGTCTGACTGCAAGCGAAAGTGATTTAGGCTTACTCCGTATCGCTACCCAGGCAGAAGTAAACGCGGGTACTGATAACACCAAAGCGATCACCCCGCAAAAACTCGCTGCTGTGAAGGGTTCCGGCTCTACTTTCGGTATGGTTAAATTAACAACAGATATCAATACCGGATTAGCGAATACTGCTTTGTCTGCTGGTGCTAACGTAGTACCGAGCAACAAAAACAGTGCAATTACTGGTGGTGCATTATATCAGGGTTCGATTAGTGCTGACAATAAATACCAGACAAAGACAGATGTTGACGCAAATATCCCGATCGGATGCATGATGCTTGCAGCGTTTAACGCCGATGTTGGTAACTTGTTTATCTGTAACGGGCGAGCGATGAACCGCAATTCAAACCCAGAACTGTTTGCCCGAATTGGTTATACATACGGCGGTTCTGGTGATATTTTCAACTTACCTGATATGCGCGGTCTTGTAGCTCGCGGCTTTGATGGTGGGCGTGGTGTGGATACAGGTCGCGGTTTTGGTACATATCAGGCTGATATGTTTGCGTATCACGAACATGATCTCCAGATGATTTACCAGAACGGCGGTAATCTTCCTAAGAGTCAAGCAGTTTATGAACTGAAAGGCGCGGAAAAAAATGACCAACGTGTTATGCACCTGAATAACGATTACAGCAAAGCATTAGGTACTGGCGGAAACGAAACGCGAATGAAAAACCTTGCGGTCAACTACGTAATTCGAGTACGATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)