Phage RBP Database

UniProt accession

A0AAE9BP15 [UniProt]

Protein name

Pectin lyase

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

Protein sequence

MALNFPISPSVGEEFAASNGVTYEWDGAKWDSITAFPSGGSSGGGSTGISEAPNDGQQYGRQNQSWTVIVPNSGGGSGEGASGYTNVRDLGAVGNGSTDDTTAINNALQLGGSVYFPAGTYLVTSTITVENKGLHMYGDGQASRIVFDPASEGDDFLRLLYNDGTPNPNQAYAISNLVIHAKTNKACGTGVKLHFTGGSTLVGVVNKLTFTNVDIGSEFASDADSGYFKKALHLLNSAGVVGTNLNIYTNSKTKVEYGVTDSVGIDIENSMAGHAMIRTLYLNNFYIQRYHTGIRAYSSAGTSYNSLESLYLSQGELLASKAMRMERISAVTVIGIHSDVRDYFLDSSNDYGDIHYASTIRICGSDIRANRVDSEDTTTQDYLIKIKGQQTMITGNSIFSFKNTEGVIQTGGSNSNQINTVITGNHFSGNGNSGFNVLNTAAGSREITFGGNTLEAFGGNTNPITNVVGSELLVYGQRSGNTV

Physico‐chemical properties

protein length:	483 AA
molecular weight:	51027,42770 Da
isoelectric point:	5,04698
aromaticity:	0,08903
hydropathy:	-0,25466

Domain architecture

A0AAE9BP15

1 483 aa

ATT 48–70 · STR 79–474 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:6.20.230.10
ATT

G3DSA:6.20.230.10 IPR012334

IPR011050
STR

IPR011050

IPR024535
ENZ

IPR024535

A0AAE9BP15

1483 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0582
STR

DC_0582

A0AAE9BP15

1483 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:6.20.230.10	ATT	G3DSA:6.20.230.10	48	70	Merged direct domain	G3DSA:6.20.230.10	N-terminal	Low	Positional only	46 proteins / 46 hits
IPR012334	STR	IPR012334	79	474	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	79	470	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR024535	ENZ	DC_0410	85	306	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

A0AAE9BP15

1 483 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	99	99	0,9707
Central domain	100	472	374	0,9893
C-terminal	473	483	10	0,4086

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Synechococcus T7-like virus S-TIP28 [NCBI] · taxon 1332140

Uroviricota Caudoviricetes Autographivirales Tiranvirus Tiranvirus STIP28

Host No host information

No CDS data available.

	Description	Category	Evidence (source)
GO:0098015	virus tail	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0016829	lyase activity	Molecular Function	IEA:UniProtKB-KW (UniProt)
GO:0098994	symbiont entry into host cell via disruption of host cell envelope	Biological Process	IEA:UniProtKB-KW (UniProt)
GO:0098996	symbiont entry into host cell via disruption of host cell glycocalyx	Biological Process	IEA:UniProtKB-KW (UniProt)

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)