Phage RBP Database

Genbank accession

QZA70026.1 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 1,00

Protein sequence

MYFVDFEKFGIRSDGTEARATTDGWIAALKEAVELGYHTVYVPEGLYLIDAVSTVGSLPEYGGGLMFPSNIEVLFHERALFKVAPNSSTGYACFNLENVENVTLRGGTIIGDRYDHDYVTDGVPDNRKTHEWGHGIHIRGCRNITVENATVMNCTGDNIWVPAKGMMNWEGSTYIPSEGITIRKCILIRGRRNNLATNGCLGMNVDDCDFIEAGGDTIGPAFGIDLEGFAENSIKYDHPYEINITNCRFKRNGKGALNINVTGKVHATNNFSDDVFSYGFSTDSTISNNTITNETGTAKPYGIDSIRKSSSETGNRTIITGNQIRGFSTGICARGVGVIVSQNYLENISSVGINPYLSEDVMVANNTVNSDCLHVWVRNSVDVQVGNNKGKGASNNYGIKVEDSSDVVVNDNKHVAKGGIQIARSTNVRIKDNDLTLIGNGNGISWDKTSQVKIVKDNWISGAAATAISGYADVYSTIISDNTLEDCKYLIAIYLNGGAHHLLRDNNIMFRRGANGGYGVQLVNTTQARLIGNDVRTMDGGTLYASYDSIGATYTKYAYNTYIGKINLNQTDSENYSTKLD

Physico‐chemical properties

protein length:	581 AA
molecular weight:	63295,72530 Da
isoelectric point:	5,45844
aromaticity:	0,08778
hydropathy:	-0,30929

Domain architecture

QZA70026.1

1 581 aa

STR 7–580 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334 IPR007742

IPR011050
STR

IPR011050 IPR012334

IPR006626
Unmapped

IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

IPR039448
ENZ

IPR039448 IPR011050

QZA70026.1

1581 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0453
RBD

DC_0453

QZA70026.1

1581 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	7	334	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	27	388	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	99	140	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	130	293	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	141	163	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	177	199	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	200	228	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	239	261	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	281	307	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	314	335	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR007742	CBM	DC_0096	347	507	InterPro cluster	Periplasmic copper-binding protein NosD-like, beta helix domain	C-terminal	High	Text match	28 proteins / 31 hits
IPR006626	Unmapped	-	358	403	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	376	527	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	390	580	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	404	424	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	425	448	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	474	497	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	498	524	InterPro	Parallel beta-helix repeat	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QZA70026.1

1 581 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	18	18	0,9358
Central domain	19	570	553	0,9981
C-terminal	571	581	10	0,3096

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage 043JT007 [NCBI] · taxon 2869565

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

QZA70026.1 [NCBI]

Genbank nucleotide accession

MZ501263.1 [NCBI]

CDS location

range 144688 -> 146433
strand +

CDS

ATGTACTTTGTTGACTTTGAGAAATTCGGGATCAGGTCTGACGGAACAGAAGCTAGAGCAACAACGGATGGGTGGATTGCTGCCCTTAAAGAGGCTGTAGAGCTCGGATACCACACAGTATACGTACCGGAAGGTCTTTACCTTATTGACGCTGTAAGCACTGTAGGGAGCCTTCCAGAGTACGGTGGAGGCTTAATGTTCCCATCGAATATTGAGGTTCTCTTCCACGAAAGAGCGCTGTTTAAAGTGGCGCCGAACAGTTCTACAGGGTACGCATGTTTCAACCTTGAGAATGTCGAAAACGTAACTCTGCGAGGAGGAACGATCATCGGGGACCGTTACGATCATGACTACGTTACAGACGGAGTACCGGATAACCGTAAGACTCATGAGTGGGGTCACGGCATCCACATCAGAGGTTGTCGTAACATCACAGTAGAGAATGCAACTGTCATGAACTGTACGGGAGATAATATCTGGGTCCCTGCTAAAGGCATGATGAACTGGGAAGGCAGCACTTATATACCTTCTGAAGGAATCACTATCCGTAAGTGTATACTGATCCGGGGAAGACGTAACAACTTAGCCACGAACGGTTGCCTTGGTATGAATGTGGATGACTGTGATTTTATCGAAGCTGGCGGAGACACTATCGGACCTGCATTCGGTATCGACTTAGAGGGTTTTGCTGAAAATAGCATAAAGTACGACCACCCTTATGAAATCAACATCACGAACTGCCGCTTCAAAAGAAACGGTAAAGGTGCCCTAAACATCAACGTTACAGGGAAAGTACATGCTACAAATAACTTCTCCGATGACGTGTTCAGCTACGGATTCTCAACAGACAGCACAATCAGTAACAACACGATCACTAATGAGACAGGAACAGCGAAGCCTTACGGTATAGACTCCATCCGTAAGTCCTCCTCCGAAACGGGTAACCGTACGATCATTACAGGCAACCAGATCAGAGGATTTTCTACAGGAATTTGTGCTCGGGGTGTTGGGGTTATTGTCAGCCAGAACTACCTTGAAAACATTAGCTCTGTAGGGATCAACCCTTACCTTTCTGAAGACGTTATGGTAGCTAACAACACGGTTAACAGTGACTGCTTGCATGTCTGGGTCCGTAACTCCGTAGATGTTCAGGTAGGTAACAACAAGGGTAAAGGCGCTTCTAACAATTATGGAATCAAAGTAGAAGACTCCAGCGATGTAGTTGTCAATGATAACAAACACGTAGCTAAGGGCGGAATCCAAATTGCCCGGTCAACAAATGTACGTATTAAAGACAACGATCTAACTCTTATTGGGAACGGAAATGGTATTAGCTGGGACAAGACTTCCCAAGTGAAAATAGTTAAGGATAACTGGATAAGTGGTGCCGCAGCAACTGCCATTTCAGGCTATGCAGACGTGTACTCCACTATTATTTCAGATAATACCTTAGAAGACTGTAAATATCTAATCGCTATCTACCTGAATGGTGGTGCTCATCACCTGCTCCGAGATAATAACATCATGTTCAGAAGAGGTGCCAACGGAGGTTATGGGGTCCAGTTAGTAAACACCACGCAGGCTAGACTAATCGGTAATGATGTTCGTACGATGGACGGAGGCACTCTATACGCTTCTTATGACTCTATAGGCGCAACTTACACAAAGTATGCGTACAACACGTATATCGGTAAGATCAACCTTAACCAAACGGACTCTGAAAACTACAGCACAAAATTAGACTAA

Title	Authors	Date	PMID	Source
Comparative Genomics of Bacillus subtilis Phages Related to phiNIT1 from Desert Soils of the Southwest United States	Vill,A.C., Delesalle,V.A., Magness,L.H., Chaudhry,B.E., Lichty,K.B., Strine,M.S., Guffey,A.A., DeCurzio,J.M. and Krukonis,G.P.	2023	—	GenBank

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature