Protein

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Genbank accession
AEI70869.1 [GenBank]
Protein name
stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPVLAVTVAGQPFDMMGYVAEQSVFGLFFKSAYDAFNFENNVLTKITDADYPGWSTVTPTSITRTGSTATVTLPAPVNWQSGSTVTIAGAAQAEYNGSVLITVTDATHFTYAVTGTPTTPATGTITAKGGRTTVPGVAYLDGYFFVMDQNAVIYNSGLNDPTAWGALDFITAAIEPGGGVALAKSQNYLIAFKEWSTEFFYDVGNPTGSPLSPVLSAFTLVGCAVGESVAELDETVYWVSKARQKGRAVHKMVGLQQQLVSTPDIDRILATSDLSSVYAYGVKLSGHSFYILGLRDIDVTLAYDATAGTWAQWSSLTAQTPKSCTLTQSGGVATAACTAHGYADGAAVTIAGATPSDYNGLKQIRVTSADAFIFSVASGAASPATGTITATGYDEGYFRYTHYVSAAGRDLVLHETTGALVEITPAAYTDDGAPIALKLRTGKLDSGNENYKSIGQIRVIGEKQGGEAMLRWSDDDYTTNSACRPVDLSSVQARIRRCGAYRRRSFEVLHIAALPVQLEALELD
Physico‐chemical
properties
protein length:524 AA
molecular weight: 55449,45360 Da
isoelectric point:4,97235
aromaticity:0,09924
hydropathy:0,03435

Domains

Domains [InterPro]
IPR023366
STR
56–134
IPR023366 IPR023366
DC_1658
STR
60–325
DC_1658 IPR023366
DC_2213
RBD
375–524
DC_2213
AEI70869.1
1 524
Architecture
STR
RBD
STR 56-392 | RBD 393-524
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEI70869.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 44 44 0,8170
Central domain 45 243 200 0,3458
C-terminal 244 524 280 0,4578
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-44
Central
45-243
C-terminal
244-524

Taxonomy

  Name Taxonomy ID Lineage
Phage EBPR podovirus 1
[NCBI] 		1048515 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEI70869.1 [NCBI]
Genbank nucleotide accession
JF412294 [NCBI]
CDS location
range 15582 -> 17156
strand -
CDS
ATGCCAGTCCTCGCCGTGACCGTTGCTGGACAGCCATTCGACATGATGGGGTATGTCGCCGAGCAGTCAGTTTTCGGCCTGTTCTTCAAATCTGCATACGATGCATTCAATTTCGAGAATAACGTGCTGACAAAAATCACCGACGCAGATTATCCCGGATGGAGCACGGTCACGCCGACAAGCATAACGCGAACTGGGTCGACTGCGACGGTCACGCTGCCTGCGCCAGTCAACTGGCAATCTGGATCGACCGTGACAATCGCTGGCGCTGCACAAGCTGAATACAACGGCAGCGTTCTGATTACCGTCACTGATGCGACGCACTTCACTTACGCAGTCACCGGGACTCCGACGACGCCGGCAACGGGCACGATAACCGCGAAGGGCGGGCGAACGACGGTGCCAGGGGTCGCCTATCTGGACGGGTATTTCTTCGTCATGGACCAGAATGCCGTTATCTATAACAGCGGGCTGAATGACCCGACAGCATGGGGAGCGCTGGACTTCATAACGGCTGCGATCGAGCCTGGCGGCGGGGTGGCGCTGGCAAAGTCGCAGAATTACCTGATCGCATTCAAGGAATGGTCGACGGAGTTTTTCTACGACGTTGGCAACCCGACAGGTTCGCCGCTGTCGCCGGTGCTGTCCGCGTTCACGCTGGTGGGTTGCGCTGTTGGCGAGTCGGTCGCGGAGCTTGATGAGACGGTCTATTGGGTGTCGAAAGCTCGGCAGAAGGGGCGGGCGGTCCACAAAATGGTCGGCCTGCAACAGCAGCTTGTCAGCACGCCGGACATTGACCGCATCCTGGCAACGTCGGACCTATCGAGCGTCTACGCCTATGGCGTCAAGCTGTCCGGGCATTCGTTCTACATCTTGGGCCTGCGCGACATTGACGTGACGCTGGCCTATGACGCGACGGCTGGAACCTGGGCGCAATGGTCGAGCTTGACGGCGCAAACGCCGAAGTCATGCACGCTCACGCAGTCGGGCGGCGTGGCGACCGCGGCATGCACGGCGCACGGCTACGCAGACGGGGCGGCGGTCACGATCGCGGGGGCAACGCCAAGCGACTACAACGGCCTGAAACAGATTCGCGTCACATCCGCCGACGCCTTCATATTCAGCGTCGCCAGCGGCGCCGCAAGCCCGGCGACGGGCACGATTACGGCGACCGGGTACGACGAGGGCTACTTCCGGTACACGCACTATGTGTCTGCGGCCGGCCGCGACCTTGTTCTGCACGAAACGACCGGAGCGCTTGTCGAAATCACTCCGGCCGCCTACACCGACGACGGCGCCCCGATCGCGCTGAAGCTCCGCACAGGCAAGCTCGACAGCGGCAACGAGAACTACAAGAGCATTGGTCAGATTCGCGTCATCGGCGAGAAGCAGGGCGGCGAGGCGATGCTGCGATGGTCGGACGACGACTACACGACGAACTCGGCCTGCCGTCCTGTTGATCTGTCGTCGGTGCAGGCGCGCATTCGGCGGTGCGGGGCGTATCGGCGCAGAAGTTTTGAAGTGCTGCACATCGCCGCATTGCCGGTGCAGCTTGAAGCGCTCGAATTGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c758ef4bcfeca5cce9025f3fadc6809703810be5d22a61d8748a5aa4a3fd687
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8440
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System Skennerton,C.T., Angly,F.E., Breitbart,M., Bragg,L., He,S., McMahon,K.D., Hugenholtz,P. and Tyson,G.W. 2011 21625595 GenBank