Protein

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Genbank accession
YP_009875561.1 [GenBank]
Protein name
virion protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,54
Seq2Symm
I confidence 0,966
I 0,966
C1 0,082
C2 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MPNILFASNSVSHFPGSLIGSPSWSWDDSRVPYSIHTLSLNPVSSPMFKGSETNETWVHFRMGANSWYVNNNENICEITDAEGNKLIGLSYHNRTSEGYHTYLTADGTQYSSVRYIPMRISHVRTYDIRILHNSLIARVEVYVNEILIDTIERNINDQMNVPRFLVLGGGYGNSGDMDSYYSEIIVADGDTRNARLDLIRPVATGVYGNWLGAVTTLADDDPTTGMTTVLPDQKQSTILSPYGGAQNISNIVQVTTSVRGINSPDQLDHFIRMSGVDYAFPERYDIPFEKTYQVSDWRLNPATSQPWEGSELTNIEFGFESKQSS
Physico‐chemical
properties
protein length:325 AA
molecular weight: 36419,95750 Da
isoelectric point:4,84430
aromaticity:0,10462
hydropathy:-0,38862

Taxonomy

Phage
Roseobacter phage RD-1410W1-01 [NCBI] · taxon 1815984
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Roseobacter denitrificans [NCBI] · taxon 2434
cellular organisms Bacteria Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales

Coding sequence (CDS)

Genbank protein accession
YP_009875561.1 [NCBI]
Genbank nucleotide accession
NC_049372 [NCBI]
CDS location
range 5625 -> 6602
strand +
CDS
ATGCCCAATATCCTCTTCGCCTCCAACAGTGTATCCCACTTTCCGGGATCGCTCATTGGCTCCCCTTCGTGGTCGTGGGATGATTCCCGCGTGCCATACTCGATTCATACCCTGTCTCTGAACCCTGTTTCTTCTCCGATGTTCAAAGGTTCGGAGACCAATGAAACTTGGGTTCACTTCCGTATGGGTGCAAACTCTTGGTATGTGAACAACAACGAAAACATCTGTGAGATCACTGATGCTGAAGGTAACAAGCTGATCGGTCTCAGTTACCACAACCGGACCTCTGAGGGTTATCACACCTACCTGACGGCAGATGGCACACAGTATTCAAGTGTTCGGTACATCCCGATGAGGATCAGCCATGTTCGGACATATGATATCCGGATTCTCCACAACTCCTTGATCGCTCGTGTCGAGGTGTATGTGAATGAGATTCTGATTGATACCATCGAACGCAACATCAACGACCAGATGAATGTACCTCGTTTTCTGGTTCTCGGTGGTGGGTATGGGAACTCAGGTGATATGGATTCCTACTACTCCGAGATCATCGTTGCTGATGGTGATACCCGGAATGCTCGTCTGGACCTCATCCGTCCGGTCGCCACAGGTGTCTACGGAAACTGGCTCGGTGCTGTTACTACTCTGGCAGATGACGATCCTACAACTGGTATGACCACGGTTCTCCCTGATCAGAAGCAGTCCACGATCCTCTCTCCCTATGGTGGTGCTCAGAACATCTCCAACATCGTTCAAGTGACCACATCGGTTCGGGGTATCAACTCTCCTGATCAACTGGATCACTTCATCCGGATGTCGGGGGTCGATTACGCCTTCCCAGAGCGGTATGACATTCCGTTCGAGAAAACCTATCAGGTCTCTGATTGGCGTCTGAATCCGGCTACCTCTCAGCCGTGGGAAGGTTCGGAACTGACCAACATCGAGTTCGGCTTCGAGTCCAAACAGTCATCTTAA

Genome Context

Tertiary structure

YP_009875561.1
ESMFold2 structure
Source ESMFold2
pLDDT 87.7
Oligomeric state monomer
Download structure