Protein

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Genbank accession
YP_004782208.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MLIDFTKETLSLYTSSEDYFPVLVTRVVDYKEAEEGKPDFYLIGVRTDLPQQVITIIHPFRNEIPVEPGDYILVKRLSAGYSIFVAKLNKKFDEENRENERFIFKPTIPQFSDKKSFGQSYNSSLINLTYTGSYLKKEPDALYKRFVEFPSYDLYRSSYDVFNYDEKFWEILNDKNEDEISRKYIFHLSENPTYKDYLLDRNKDDNFPFRPDVVFDFTHEHSPKNKQDKLLKLDKKITLFTEENTDKYPFLQAKEEIDENLILTSYDEILNTKAEGYLGEDIFYAQEFREIRLGRNKIGLYKINKNDSFLLLKTSKDQQFAAINFGNKSQLRVRNDDGSSILLEKGDNFNRTFISTYPSLLIEHFYKENYQHVLILNAEKESFKNLQKSSSSLNDYSFGLLLRGNKDTSLKRTDFTYNNALSGGQSVIFGTKKQNSFSYMTLSSDASKSIFNAHVENSTYVDVFADSSSGCFKVENNKNGVKKFTFCADQFIIEDYLTVQKDLLVNNVYVNGTIYETSDIRVKDDIKQISNAVEKINKLSGYTFTKEKEFSAGLIANEVLEVFPEAVRKDRDGYLQLNYNAVVALLVEALKEKKKKIDELEDRIKKIEEFLKG
Physico‐chemical
properties
protein length:613 AA
molecular weight: 71334,43270 Da
isoelectric point:5,49596
aromaticity:0,13051
hydropathy:-0,58254

Domains

Domains [InterPro]
DC_1202
STR
182–612
DC_1202
IPR030392
CHP
518–604
IPR030392
IPR030392
CHP
518–568
IPR030392 Coil
YP_004782208.1
1 613
Architecture
STR
STR 182-612 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004782208.1
1 613
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,9392
Central domain 35 303 270 0,2281
C-terminal 304 613 309 0,8010
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-34
Central
35-303
C-terminal
304-613

Taxonomy

  Name Taxonomy ID Lineage
Phage Thermus phage TMA
[NCBI] 		699370 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Thermus thermophilus HB27
[NCBI] 		262724 Bacteria > Deinococcus-Thermus > Deinococci > Thermales > Thermaceae > Thermus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004782208.1 [NCBI]
Genbank nucleotide accession
NC_015937 [NCBI]
CDS location
range 7 -> 1848
strand -
CDS
ATGCTTATAGACTTCACGAAAGAAACTTTATCGCTATATACTTCAAGTGAAGACTATTTTCCAGTATTAGTTACTAGGGTTGTTGATTATAAAGAAGCAGAGGAAGGAAAACCAGATTTTTATCTTATAGGAGTAAGGACAGATTTACCTCAACAAGTTATAACAATAATCCATCCTTTTAGAAACGAAATACCTGTTGAACCTGGTGATTACATACTTGTAAAACGACTAAGCGCTGGATATTCAATTTTTGTTGCGAAACTAAATAAAAAGTTTGATGAAGAAAACAGAGAAAACGAAAGGTTTATATTTAAGCCAACAATACCTCAATTTTCTGATAAAAAATCTTTTGGTCAATCTTACAACTCTTCTCTTATAAATCTAACTTATACTGGTTCTTACCTAAAAAAAGAACCAGATGCACTTTACAAAAGATTTGTTGAATTTCCTTCTTATGACCTTTATAGGTCAAGTTATGATGTCTTTAACTACGATGAGAAATTTTGGGAAATATTAAACGACAAAAACGAAGACGAAATTTCAAGGAAATACATATTTCACCTTTCAGAAAACCCAACCTATAAAGACTACTTACTAGATAGAAACAAAGATGATAATTTTCCTTTTAGACCAGATGTAGTATTTGATTTTACGCATGAACATTCTCCCAAAAATAAACAAGATAAGCTGTTGAAATTAGACAAAAAAATAACTTTATTTACAGAAGAAAATACAGATAAGTATCCTTTTCTCCAAGCCAAAGAAGAGATAGATGAAAACTTAATACTAACATCTTACGATGAAATCTTAAATACAAAAGCAGAAGGATATCTTGGAGAAGATATATTCTATGCACAAGAGTTTAGAGAGATAAGGTTAGGAAGAAACAAAATCGGTCTTTATAAGATAAACAAAAACGATTCTTTTCTTCTTTTAAAAACAAGCAAAGATCAGCAGTTTGCAGCGATCAATTTTGGAAATAAAAGCCAATTAAGAGTAAGAAACGATGATGGCTCATCAATTTTATTAGAAAAAGGCGATAATTTTAATAGAACATTTATTTCAACTTATCCTTCTTTGCTGATTGAGCATTTTTACAAAGAAAACTATCAGCACGTTTTAATTCTAAATGCCGAAAAAGAATCGTTTAAAAACTTACAAAAATCTTCTTCCAGCTTAAATGACTATTCTTTTGGATTACTTTTAAGAGGAAACAAAGATACTTCTTTGAAAAGAACAGATTTTACATATAACAATGCTTTGAGTGGTGGTCAATCTGTAATTTTTGGTACAAAGAAGCAAAATTCCTTTTCTTACATGACACTTTCTTCAGATGCGTCTAAGTCAATTTTTAATGCGCATGTAGAAAACTCAACTTATGTAGATGTTTTTGCTGATTCTTCTAGTGGCTGCTTTAAAGTAGAAAATAATAAAAACGGAGTAAAAAAATTTACTTTTTGCGCAGACCAGTTTATTATTGAGGATTATTTAACGGTTCAAAAGGATTTATTGGTTAATAATGTCTATGTAAATGGAACAATTTACGAAACTTCAGATATAAGAGTAAAAGATGATATCAAGCAAATAAGCAATGCGGTGGAAAAAATAAATAAATTAAGCGGATACACATTTACTAAAGAAAAAGAATTTAGTGCGGGTCTTATAGCTAACGAAGTTCTAGAAGTTTTTCCTGAAGCTGTAAGGAAGGATAGAGATGGTTACCTACAATTGAATTACAACGCTGTTGTAGCACTCTTAGTTGAAGCCTTAAAAGAAAAGAAAAAGAAAATTGATGAGTTAGAAGATAGAATAAAAAAGATTGAGGAATTTTTGAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4197764f86ced7431dce7d5e145b867e66ee66a97ab68e4dfd6313c9f97402f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5080
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50