Protein

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Genbank accession
YP_004782208.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MLIDFTKETLSLYTSSEDYFPVLVTRVVDYKEAEEGKPDFYLIGVRTDLPQQVITIIHPFRNEIPVEPGDYILVKRLSAGYSIFVAKLNKKFDEENRENERFIFKPTIPQFSDKKSFGQSYNSSLINLTYTGSYLKKEPDALYKRFVEFPSYDLYRSSYDVFNYDEKFWEILNDKNEDEISRKYIFHLSENPTYKDYLLDRNKDDNFPFRPDVVFDFTHEHSPKNKQDKLLKLDKKITLFTEENTDKYPFLQAKEEIDENLILTSYDEILNTKAEGYLGEDIFYAQEFREIRLGRNKIGLYKINKNDSFLLLKTSKDQQFAAINFGNKSQLRVRNDDGSSILLEKGDNFNRTFISTYPSLLIEHFYKENYQHVLILNAEKESFKNLQKSSSSLNDYSFGLLLRGNKDTSLKRTDFTYNNALSGGQSVIFGTKKQNSFSYMTLSSDASKSIFNAHVENSTYVDVFADSSSGCFKVENNKNGVKKFTFCADQFIIEDYLTVQKDLLVNNVYVNGTIYETSDIRVKDDIKQISNAVEKINKLSGYTFTKEKEFSAGLIANEVLEVFPEAVRKDRDGYLQLNYNAVVALLVEALKEKKKKIDELEDRIKKIEEFLKG
Physico‐chemical
properties
protein length:613 AA
molecular weight: 71334,43270 Da
isoelectric point:5,49596
aromaticity:0,13051
hydropathy:-0,58254

Domains

View on InterPro
Domain architecture
YP_004782208.1
1 613 aa
CHP 518–604 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_004782208.1
1 613 aa
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,9392
Central domain 35 303 270 0,2281
C-terminal 304 613 309 0,8010
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Thermus phage TMA [NCBI] · taxon 699370
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Thermus thermophilus HB27 [NCBI] · taxon 262724
Bacteria Deinococcus-Thermus Deinococci Thermales Thermaceae Thermus

Coding sequence (CDS)

Genbank protein accession
YP_004782208.1 [NCBI]
Genbank nucleotide accession
NC_015937 [NCBI]
CDS location
range 7 -> 1848
strand -
CDS
ATGCTTATAGACTTCACGAAAGAAACTTTATCGCTATATACTTCAAGTGAAGACTATTTTCCAGTATTAGTTACTAGGGTTGTTGATTATAAAGAAGCAGAGGAAGGAAAACCAGATTTTTATCTTATAGGAGTAAGGACAGATTTACCTCAACAAGTTATAACAATAATCCATCCTTTTAGAAACGAAATACCTGTTGAACCTGGTGATTACATACTTGTAAAACGACTAAGCGCTGGATATTCAATTTTTGTTGCGAAACTAAATAAAAAGTTTGATGAAGAAAACAGAGAAAACGAAAGGTTTATATTTAAGCCAACAATACCTCAATTTTCTGATAAAAAATCTTTTGGTCAATCTTACAACTCTTCTCTTATAAATCTAACTTATACTGGTTCTTACCTAAAAAAAGAACCAGATGCACTTTACAAAAGATTTGTTGAATTTCCTTCTTATGACCTTTATAGGTCAAGTTATGATGTCTTTAACTACGATGAGAAATTTTGGGAAATATTAAACGACAAAAACGAAGACGAAATTTCAAGGAAATACATATTTCACCTTTCAGAAAACCCAACCTATAAAGACTACTTACTAGATAGAAACAAAGATGATAATTTTCCTTTTAGACCAGATGTAGTATTTGATTTTACGCATGAACATTCTCCCAAAAATAAACAAGATAAGCTGTTGAAATTAGACAAAAAAATAACTTTATTTACAGAAGAAAATACAGATAAGTATCCTTTTCTCCAAGCCAAAGAAGAGATAGATGAAAACTTAATACTAACATCTTACGATGAAATCTTAAATACAAAAGCAGAAGGATATCTTGGAGAAGATATATTCTATGCACAAGAGTTTAGAGAGATAAGGTTAGGAAGAAACAAAATCGGTCTTTATAAGATAAACAAAAACGATTCTTTTCTTCTTTTAAAAACAAGCAAAGATCAGCAGTTTGCAGCGATCAATTTTGGAAATAAAAGCCAATTAAGAGTAAGAAACGATGATGGCTCATCAATTTTATTAGAAAAAGGCGATAATTTTAATAGAACATTTATTTCAACTTATCCTTCTTTGCTGATTGAGCATTTTTACAAAGAAAACTATCAGCACGTTTTAATTCTAAATGCCGAAAAAGAATCGTTTAAAAACTTACAAAAATCTTCTTCCAGCTTAAATGACTATTCTTTTGGATTACTTTTAAGAGGAAACAAAGATACTTCTTTGAAAAGAACAGATTTTACATATAACAATGCTTTGAGTGGTGGTCAATCTGTAATTTTTGGTACAAAGAAGCAAAATTCCTTTTCTTACATGACACTTTCTTCAGATGCGTCTAAGTCAATTTTTAATGCGCATGTAGAAAACTCAACTTATGTAGATGTTTTTGCTGATTCTTCTAGTGGCTGCTTTAAAGTAGAAAATAATAAAAACGGAGTAAAAAAATTTACTTTTTGCGCAGACCAGTTTATTATTGAGGATTATTTAACGGTTCAAAAGGATTTATTGGTTAATAATGTCTATGTAAATGGAACAATTTACGAAACTTCAGATATAAGAGTAAAAGATGATATCAAGCAAATAAGCAATGCGGTGGAAAAAATAAATAAATTAAGCGGATACACATTTACTAAAGAAAAAGAATTTAGTGCGGGTCTTATAGCTAACGAAGTTCTAGAAGTTTTTCCTGAAGCTGTAAGGAAGGATAGAGATGGTTACCTACAATTGAATTACAACGCTGTTGTAGCACTCTTAGTTGAAGCCTTAAAAGAAAAGAAAAAGAAAATTGATGAGTTAGAAGATAGAATAAAAAAGATTGAGGAATTTTTGAAGGGGTAA

Genome Context

Tertiary structure

YP_004782208.1
ESMFold structure
Source ESMFold
pLDDT 50.8
Oligomeric state monomer
Download structure