Phage RBP Database

Genbank accession

WPF71394.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C3 confidence 0,595

C3	0,595
C1	0,289
C2	0,004

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAKGYSLDALVKEKWSRYAESLTSGLDFNDFYGVEKSGIYMVAANNIATTLLNIPEKVAGVLEVMPWTSTGLSIQRYTTYNFARLYVRTKESPTVDWGPWKLQIDASNIFNTIYPIGIVLQFDDATNPNNSFPGTVWEQITDGRAARAATGPEAGTADGQIGSVAGSDTATIAVANLPGHTHGMQNHTHGIAAHSHTMAHTHTINHDHPAVTSSSSGAHTHSLSGTAESNGNHTHSVPSVNGGNQGGVIPLRSGRNDIEAWSTNTGGAGAHTHHVSGTANSSGAHTHTVDLPNYTGTSGGSSAGSTGGTALTTGGPSNNETTSTGGGTALNVRNSSHYYAFWKRVA

Physico‐chemical properties

protein length:	346 AA
molecular weight:	36123,92930 Da
isoelectric point:	6,34968
aromaticity:	0,07225
hydropathy:	-0,40145

Domain architecture

WPF71394.1

1 346 aa

STR 19–101 · ATT 109–225 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

cd19958
STR

cd19958 IPR053827

WPF71394.1

1346 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0905
STR

DC_0905

WPF71394.1

1346 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
cd19958	STR	DC_0464	19	101	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR053827	ATT	DC_0313	109	225	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Proteins with similar domain architecture

Phage

Escherichia phage vB_EcoM_JL1 [NCBI] · taxon 3096003

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

WPF71394.1 [NCBI]

Genbank nucleotide accession

OR791690.1 [NCBI]

CDS location

range 5447 -> 6487
strand -

CDS

ATGGCTAAAGGTTATTCTTTAGATGCGTTGGTTAAGGAGAAGTGGTCGAGATATGCCGAATCCCTAACCAGTGGGCTGGACTTTAATGACTTCTACGGTGTGGAAAAGTCTGGCATATACATGGTTGCTGCCAATAATATAGCCACCACATTGCTGAACATTCCAGAAAAGGTTGCTGGTGTGCTTGAGGTAATGCCCTGGACATCAACAGGGCTAAGCATTCAGAGATACACTACATACAACTTTGCCAGACTATATGTTCGCACGAAGGAGTCCCCAACTGTGGACTGGGGTCCGTGGAAGCTTCAAATAGATGCCTCAAACATATTTAATACTATATACCCAATCGGTATTGTATTGCAGTTTGATGATGCCACAAACCCGAACAACTCGTTCCCAGGAACTGTGTGGGAACAAATTACCGATGGTCGCGCTGCCCGTGCTGCAACTGGCCCAGAAGCTGGGACGGCTGATGGTCAGATTGGTTCAGTAGCTGGGTCAGATACAGCCACCATTGCTGTAGCCAACCTGCCAGGTCACACGCACGGAATGCAAAACCACACTCACGGTATTGCAGCCCACTCGCACACGATGGCTCACACCCACACCATCAACCACGACCACCCAGCAGTTACATCAAGTTCCAGTGGTGCGCATACTCACTCCTTATCGGGCACTGCCGAGAGCAATGGCAACCACACTCACTCTGTGCCGTCGGTTAACGGTGGTAATCAAGGTGGCGTCATACCGCTCCGCTCAGGTCGAAACGATATAGAAGCATGGTCCACAAACACTGGTGGTGCTGGTGCTCACACCCATCACGTAAGTGGGACTGCCAACTCCTCCGGCGCTCACACCCACACAGTGGACTTGCCAAACTACACAGGTACAAGTGGAGGCTCTAGTGCAGGCAGCACTGGTGGCACGGCTCTGACCACTGGTGGCCCCAGCAATAACGAAACAACCTCAACTGGTGGCGGGACCGCACTCAATGTGCGCAACTCTTCACACTATTACGCCTTCTGGAAACGGGTGGCTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)