Protein

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Genbank accession
YP_004421506.1 [GenBank]
Protein name
collagen like minor tail
RBP type
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,81
TF
Evidence Phold
Probability 1,00
Protein sequence
MANLIKLRRSAVQGNIPTTAQIALGELALNTYDGKLYAKKSVGGVESIVELSGGGGGGGTTGTPLRYLHVDGTTTQNLSTTEVTLDFDTTITSSGAGDFTVGSGGEITVLNNGTYYVEYSATGDQTSGNNRVIVFAHLEVNGTVVTGSQASVYSRNIADGAFSAVGSSVVNLNANDVIRVRASSDINSIIATIDNSISGLSIFSLSGSGPQGEQGIQGPQGIQGEPGIQGEQGIQGPQGIQGEPGIQGEQGIQGEQGIQGETGPAGPTGPAGPSDIPQNAKTTSYTLISSDNGKHISITTGGVTVPSGVFSSGNVISVYNNSSTAQTVTQGTGVTLRTGGTATTGNVTLSQRGLCTILCVSSNEFVVTGHIS
Physico‐chemical
properties
protein length:372 AA
molecular weight: 37447,62400 Da
isoelectric point:4,65781
aromaticity:0,04301
hydropathy:-0,11371

Domains

Domains [InterPro]
IPR008983
71–205
IPR008983 IPR050149
IPR008160
210–266
IPR008160
G3DSA:1.20.5.320
245–300
G3DSA:1.20.5.320
YP_004421506.1
1 372
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBS2
[NCBI] 		753084 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0204
[NCBI] 		232353 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004421506.1 [NCBI]
Genbank nucleotide accession
NC_015463 [NCBI]
CDS location
range 38798 -> 39916
strand +
CDS
ATGGCTAACTTGATCAAACTGCGTCGCAGTGCCGTCCAAGGCAATATCCCTACGACGGCCCAGATCGCACTAGGCGAGCTTGCTTTGAACACATACGACGGCAAGTTGTATGCAAAGAAGTCGGTTGGCGGTGTTGAGTCAATCGTTGAGCTGAGCGGTGGCGGAGGAGGCGGCGGGACCACCGGTACGCCTCTGCGCTATTTGCACGTTGACGGCACAACTACTCAGAACCTGTCAACAACAGAAGTCACGCTCGACTTTGACACCACCATCACCTCCTCCGGCGCGGGTGACTTCACCGTAGGGAGCGGCGGCGAGATCACCGTACTCAACAACGGTACTTACTACGTTGAGTACAGCGCCACAGGCGACCAGACATCAGGCAACAACCGTGTGATAGTGTTCGCGCACCTTGAGGTGAACGGAACCGTTGTCACGGGCTCGCAGGCCAGTGTTTACTCCAGGAACATAGCTGATGGTGCGTTTAGCGCCGTTGGCTCATCCGTCGTCAACTTAAACGCAAACGATGTAATTAGGGTTAGGGCAAGCAGTGATATAAACTCGATTATTGCCACCATCGACAACAGCATTTCTGGCTTGTCGATATTCAGCCTTAGCGGCTCTGGGCCTCAGGGAGAGCAGGGAATTCAGGGCCCGCAAGGAATTCAAGGCGAGCCAGGAATTCAAGGTGAGCAAGGAATTCAAGGCCCGCAAGGAATTCAAGGCGAGCCAGGAATTCAAGGTGAGCAAGGAATTCAAGGCGAGCAAGGAATTCAAGGCGAAACCGGTCCGGCCGGGCCAACCGGGCCAGCGGGTCCTAGTGATATTCCCCAGAATGCAAAGACCACCTCTTACACGCTTATCAGTAGTGACAATGGCAAGCACATCAGCATTACCACTGGAGGCGTGACTGTACCCAGCGGGGTATTCAGCTCTGGCAACGTTATCTCTGTCTATAACAACAGCAGCACGGCGCAGACCGTCACACAGGGCACTGGGGTGACCTTGCGCACAGGGGGCACCGCCACCACAGGGAACGTGACGCTAAGCCAGAGGGGGTTATGCACGATCCTCTGTGTTTCGTCTAACGAGTTCGTCGTTACGGGGCATATTTCCTGA

Tertiary structure

PDB ID
952177a0e98d9e32a176c20b87543ee834567b4f1209261967b977c73dee224d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50