Phage RBP Database

Genbank accession

YP_009784963.1 [GenBank]

Protein name

baseplate hub protein

RBP type

TSP

Evidence RBPdetect

Probability 0,82

Seq2Symm

C1 confidence 0,244

C1	0,244
C3	0,026
C2	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKQILDSARNYLKNNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDVIYNGILYQAGKVKSISSHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRTVSIHQAIITEDGSILPVDPDTNGPLLYFRGRITGGGIKDNISTSGVGTSTITWNCSNQFYDFDRVNGRYTDDASHRGLEVVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPIFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICVDANDSSARTCFGTKKIVGDTMQRIASGISSSSPSVHGQEYRYNDGNGDIRIWTYHGKSNQTASDVLVNIARNRGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKVKVYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTNPLAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRVTVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNSITFYNSNYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWDRKYFLVDEVENSREGKINVTLQEYGEDVFINSGQVDNSGNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWLPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIHDPQNRMLRSVRIENQYTYDYLLTYNKADFALQNSDALGINRKLYFRIRAEGDDGEQSVEWASI

Physico‐chemical properties

protein length:	949 AA
molecular weight:	106968,00760 Da
isoelectric point:	5,21671
aromaticity:	0,11170
hydropathy:	-0,42645

Domain architecture

YP_009784963.1

1 949 aa

ATT 595–686 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR032876
ATT

IPR032876

YP_009784963.1

1949 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0187
STR

DC_0187

YP_009784963.1

1949 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032876	ATT	DC_0307	595	686	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_009784963.1

1 949 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	312	312	0,9326
Central domain	313	526	215	0,3799
C-terminal	527	949	422	0,0039

Note: Constraints were applied during segmentation.
Fixed 19 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage DT571/2 [NCBI] · taxon 1567007

Uroviricota Caudoviricetes Demerecviridae Tequintavirus Tequintavirus DT5712

Host

Escherichia coli HS [NCBI] · taxon 331112

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli

Genbank protein accession

YP_009784963.1 [NCBI]

Genbank nucleotide accession

NC_047749 [NCBI]

CDS location

range 78258 -> 81107
strand -

CDS

ATGAAACAAATACTAGATAGTGCTAGAAACTACTTAAAAAATAATAGCAGAATAAAAACTGCTAGTCTAATTTCCCTAGAGTTACCTGGCTCTACTGGTACTAGTACTGCTTTTATTTATTTAACTGATTATTTTAGGGATGTAATATATAATGGCATCCTATACCAGGCAGGTAAAGTTAAGTCTATTAGCTCACACAAACAAAACAGAGATTTATCTATTGGCAGTCTATCTTTTACCATTACTGGCACAGCACAGGATGAAGTGCTAAAACTAGTACAAAATGGCGTGTCCTTCTTAGATAGAACCGTATCAATTCATCAAGCAATTATTACTGAAGATGGTTCTATTCTGCCAGTAGACCCAGATACAAATGGTCCTTTACTGTACTTTAGGGGAAGGATTACTGGAGGAGGCATTAAAGATAACATTAGTACCTCTGGAGTAGGAACTTCTACAATTACCTGGAATTGTTCTAACCAATTCTATGACTTTGATAGGGTTAATGGCAGATATACTGATGATGCTTCTCATAGGGGGCTTGAAGTTGTAGCTGGACAGCTAGTACCATCTAACGGTGCTAAAAGACCTGAGTACCAAGAAGACTATGGGTTCTTTCATGCTAATAAAAGTATATCTATACTGGCAAAGTACCAAGTACAGGAAGAAAGATACAAGCTAAAATCAAAGAAAAAATTATTTGGTTTATCTAGAAGCTACAGCCTTAAAAAATACTATGAAACTGTTACTAAGGAAGTAGATATAGATTTTAACCTTGCTGCTAAATATATACCAGTAGTTTATGGTGTACAGAAAATACCGGGGATACCTATTTTTGCTGATACAGAACTACACAATCCCAACATAGTTTATGTCGTATACGCCTTTGCTGAGGGGGAGATTGATGGTTTTCTTGATTTCTCCTTCGGTGATAATCCTATGATCTGTGTAGACGCTAATGATAGCTCCGCTAGAACCTGCTTCGGTACTAAAAAAATAGTAGGAGATACCATGCAGCGGATAGCATCTGGAATTTCCTCTAGTAGTCCATCCGTTCATGGTCAAGAGTATAGGTATAATGATGGAAATGGTGATATAAGGATCTGGACTTACCACGGAAAGTCTAATCAAACAGCCTCTGATGTGCTAGTGAACATCGCTAGAAACCGCGGGTTCTATCTTCAAAATATGAATGGCAATGGGCCTGAATACTGGGATGCTAGATATAAGCTACTAGATACTGCTTATGCCGTAGTGCGTTTTACTATTAATGAAAACAGAACTGAGATTCCAGAAGTTAGTGCTGAAATTCAAGGTAAAAAAGTAAAAGTCTATCATTCTGATGGTAGAGTAACTGCTAATAGTACTAGTTTAAATGGTATTTGGCAAACACTTGATTACTTAACCTCTGATAGATACGGCGCTAATATTACCATTGATCAGTTCCCCCTTCAGCAATTAATACAGGAAGCAGCTATTTTAGATATTATAGATGAATCCTATCAGGTATCTTGGCAGCCATATTGGAGATACGTTGGGTGGACTAATCCATTAGCGGAAAATAGACAAATAGTACAAATGAATACTATTCTGGATACATCTGAATCAGTATTTAAAAATGTGCAAGGTTTATTAGAGTCCTATGGTGGGGCTATTAACAACTTATCTGGCCAGTATAGGGTTACTGTAGAAAAATACTCTAATACTCCGTTAGAGATTAATTTTCTAGATACTTATGGCGATTTGGAGCTATCAGATACTACTGGTAGAAATAAATTCAACTCAGTTCAAGCATCTATAGTAGATCCAGCCCTTAGCTGGAAAACTAATTCCATTACATTCTATAACTCCAATTATAAGGAACAGGACAAGAACCTAGATAAAAAATTACAACTATCTTTTGCTAATATTACTAATTACTATACTGCAAGAAGTTTTGCTGATAGAGAACTTAAGAAATCCAGATACTCAAGAACACTTTCTTTCTCATTGCCGTATCAATTCATTGGTATTGAACCTAACGATGCTATTGCATTCACATATGACCGTTATGGGTGGGATAGGAAGTACTTCCTAGTAGACGAAGTGGAAAACTCTAGAGAAGGTAAGATAAATGTTACCTTACAGGAGTATGGAGAAGATGTATTCATCAACTCTGGGCAGGTTGATAATAGCGGTAATGATATCCCCGATATTAGTAATAATGTCCTTCCTCCTAGAGACTTTAAATATACTCCTACTCCTGGCGGTTTAGTAGGCTCTATAGGTAAAAATGGTGAGTTATCCTGGCTTCCGAGTCTAACCAATAATGTAGTTTACTACTCTATTGTGCACTCAGGCCATGCCGAACCTTACATAGTACAACAGTTAGAGACCAACCCTAACGAACGTATGATCCAAGAAATAATTGGGGAACCAGCAGGTCTGGCTATATTTGAGATAAGGGCAGTAGATATTAACGGTAGAAGAAGTTCTCCGGTGACTCTGTCCATAGAACTTAACTCCGCTAAAAACCTTAGTGTAGTATCTAATTTTAGGGTAACTAATACTGCCTCTGGAGATGTAACTGAGTTTGTTGGCCCAGATGTGAAACTAGCCTGGGATAGAATACCTGAAGAAGATATAATAGAGAGTATATTTTATACCCTTGAAATACACGATCCACAAAATAGGATGTTAAGAAGTGTACGTATTGAAAATCAGTATACTTATGACTATTTATTAACATATAATAAGGCAGACTTTGCTCTCCAGAACAGTGATGCTCTAGGTATAAATAGAAAATTGTATTTTCGTATTAGAGCTGAAGGGGATGATGGAGAACAGTCTGTGGAGTGGGCATCCATTTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)