Protein

View in Explore
Genbank accession
XFD46899.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,002
D3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MALTRLVDVRTPVAQFPSVNSLDELRALSPQVDGDAVVIRRAVAGGPYVNHVVYYDAADTSTPDNGYSVFVTADGKRFKDDPSEPINPLLAGFTVTANNLAQCLNTVIQAEVARIIARGAVNGGIRPIKVPHLPNLATIDGVTVYNMTDTVRQPSVLSIVLPEQGLFEWAAFTTGTGWVISNEFTGLTQTLMFRNNGGVTQGASANHPNLALDGRNSMFRGPGYNLTTFPGLRVGNVTYPSGSYAHCRDASVENLRIAGFESGLRLGSVDTYLLRFRGLDLTRNKHALSTATNFTGSVYQWANSGENIRFTECIFGDNYSHAISRNDRGHLITYVGCSFDYNVGDLFYYGSRHIGKDIIIGGHIEGVSGLLANFPVQDATDGQITLKIQLPEYFAARNVGDPYAGIRNLVFGISNRLNVDIDDMSWFHRAPYVNNAYGMVKDLSDPNNRARIKVQYPLAAQSYRYMPGIEYRINNTFTFTGTPGDPLPSSPAGGTFFAIRTGAATVVYGSAADADADGYIPVLITMGATSDTVQLMYNKPLYYGRDVKQLYGKCSIKAGTATGVVGMQTCARVIGSVTRTANLTTGAVTDTEVLAAVPTSASQDILNSLSKDAITITANDYMSTYPVPCSLIGGIYAYMGLRFTGFTGTIAVKLPLWWFSDEHPEQGYL
Physico‐chemical
properties
protein length:669 AA
molecular weight: 72376,77800 Da
isoelectric point:6,14074
aromaticity:0,10164
hydropathy:-0,06039

Domains

View on InterPro
Domain architecture
XFD46899.1
1 669 aa
RBD 18–80 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XFD46899.1
1 669 aa
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,9887
Central domain 100 460 362 0,9896
C-terminal 461 669 208 0,9903
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Klebsiella phage vB_KpP_AttikonH1N2 [NCBI] · taxon 3234957
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Klebsiella pneumoniae [NCBI] · taxon 573
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
XFD46899.1 [NCBI]
Genbank nucleotide accession
PP974226.1 [NCBI]
CDS location
range 41802 -> 43811
strand +
CDS
ATGGCACTGACTAGACTAGTAGACGTACGCACCCCTGTGGCTCAATTCCCCTCGGTAAATTCCCTGGATGAGTTGCGCGCGCTTTCGCCGCAAGTAGACGGGGATGCTGTAGTTATCAGGCGAGCTGTAGCTGGTGGGCCTTACGTCAACCACGTGGTTTATTATGATGCCGCGGATACCTCTACTCCGGATAATGGGTACTCTGTATTCGTAACCGCAGACGGTAAGCGATTTAAGGACGACCCCAGCGAGCCCATTAACCCGCTGCTAGCGGGATTCACTGTAACCGCAAATAACCTGGCGCAGTGTCTGAACACAGTTATCCAGGCGGAAGTAGCCCGCATCATTGCTCGCGGCGCTGTGAATGGTGGTATCCGTCCTATTAAGGTTCCGCACCTGCCAAACCTGGCTACCATCGATGGCGTTACGGTGTACAACATGACTGACACTGTACGCCAACCCAGCGTCTTGAGTATCGTACTACCTGAGCAAGGACTGTTTGAGTGGGCTGCATTCACCACCGGAACTGGTTGGGTTATCTCTAACGAGTTCACTGGCTTGACGCAAACTCTGATGTTCCGCAACAACGGGGGTGTGACGCAAGGGGCGAGTGCAAACCACCCGAACCTGGCTCTCGATGGCAGAAACAGCATGTTCCGTGGACCTGGTTATAACTTGACTACGTTCCCGGGGCTGCGGGTGGGTAACGTCACGTACCCTAGTGGTTCGTACGCGCATTGCCGTGACGCCTCTGTGGAGAACCTGCGTATCGCTGGGTTTGAGTCCGGATTACGTTTAGGCTCTGTGGACACGTACCTGCTGCGCTTCCGCGGTCTAGACCTTACCCGGAATAAACACGCGCTCAGCACCGCCACGAACTTTACCGGCAGCGTTTATCAGTGGGCCAACTCCGGAGAAAACATCCGATTTACCGAGTGTATCTTTGGGGATAACTACAGCCATGCCATTAGCCGCAATGACCGCGGGCACCTGATTACGTACGTAGGCTGCAGCTTCGACTACAACGTGGGGGACCTGTTCTACTACGGCTCTCGTCATATTGGTAAGGACATCATCATTGGCGGTCATATCGAGGGTGTAAGCGGACTCCTAGCGAACTTCCCTGTTCAAGATGCTACGGATGGGCAGATTACGTTGAAGATTCAACTGCCAGAGTACTTTGCTGCGCGCAACGTAGGGGACCCCTATGCTGGTATCCGGAACCTGGTGTTTGGTATCAGTAACCGCCTGAACGTGGATATTGACGATATGTCCTGGTTCCACCGTGCCCCGTACGTGAACAACGCCTACGGTATGGTGAAGGACTTATCAGACCCCAATAACCGTGCACGTATCAAGGTGCAGTATCCGTTGGCCGCGCAGTCGTACCGGTATATGCCGGGTATCGAGTACCGTATCAATAACACGTTCACCTTTACCGGCACCCCTGGGGACCCTTTACCCTCCTCCCCTGCCGGTGGGACGTTCTTTGCTATCCGTACTGGTGCAGCTACGGTGGTGTATGGTAGTGCGGCAGATGCCGATGCAGATGGCTACATCCCGGTGCTAATCACTATGGGGGCTACCTCTGACACGGTGCAGCTGATGTATAACAAACCTCTCTACTACGGGCGGGATGTTAAGCAGTTGTATGGCAAGTGCTCCATTAAGGCTGGTACTGCTACGGGTGTAGTGGGTATGCAGACGTGCGCCCGAGTCATTGGCTCTGTGACGCGCACTGCTAACTTGACTACCGGTGCAGTTACGGATACGGAGGTGCTTGCTGCGGTGCCTACTAGCGCCTCTCAGGATATTCTCAATAGCCTGAGTAAAGACGCTATAACTATCACTGCGAATGACTATATGAGCACTTACCCTGTGCCGTGCAGTCTCATCGGCGGTATTTATGCGTACATGGGCCTGCGCTTCACTGGGTTCACAGGTACTATCGCTGTGAAGCTCCCGTTGTGGTGGTTCTCGGACGAGCACCCGGAGCAGGGGTACCTGTAA

Genome Context

Tertiary structure

XFD46899.1
ESMFold structure
Source ESMFold
pLDDT 72.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against carbapenemase-producing K. pneumoniae clinical isolates Paranos,P., Siopi,M., Skliros,D., Zrelovs,N., Svanberga,K., Kazaks,A., Flemetakis,E. and Meletiadis,J. 2024-12-22 — GenBank