Protein

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Genbank accession
XFD46899.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALTRLVDVRTPVAQFPSVNSLDELRALSPQVDGDAVVIRRAVAGGPYVNHVVYYDAADTSTPDNGYSVFVTADGKRFKDDPSEPINPLLAGFTVTANNLAQCLNTVIQAEVARIIARGAVNGGIRPIKVPHLPNLATIDGVTVYNMTDTVRQPSVLSIVLPEQGLFEWAAFTTGTGWVISNEFTGLTQTLMFRNNGGVTQGASANHPNLALDGRNSMFRGPGYNLTTFPGLRVGNVTYPSGSYAHCRDASVENLRIAGFESGLRLGSVDTYLLRFRGLDLTRNKHALSTATNFTGSVYQWANSGENIRFTECIFGDNYSHAISRNDRGHLITYVGCSFDYNVGDLFYYGSRHIGKDIIIGGHIEGVSGLLANFPVQDATDGQITLKIQLPEYFAARNVGDPYAGIRNLVFGISNRLNVDIDDMSWFHRAPYVNNAYGMVKDLSDPNNRARIKVQYPLAAQSYRYMPGIEYRINNTFTFTGTPGDPLPSSPAGGTFFAIRTGAATVVYGSAADADADGYIPVLITMGATSDTVQLMYNKPLYYGRDVKQLYGKCSIKAGTATGVVGMQTCARVIGSVTRTANLTTGAVTDTEVLAAVPTSASQDILNSLSKDAITITANDYMSTYPVPCSLIGGIYAYMGLRFTGFTGTIAVKLPLWWFSDEHPEQGYL
Physico‐chemical
properties
protein length:669 AA
molecular weight: 72376,77800 Da
isoelectric point:6,14074
aromaticity:0,10164
hydropathy:-0,06039

Domains

Domains [InterPro]
IPR059934
RBD
18–80
IPR059934
DC_1149
STR
50–669
DC_1149
XFD46899.1
1 669
Architecture
RBD
STR
RBD 18-49 | STR 50-669
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFD46899.1
1 669
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,9887
Central domain 100 460 362 0,9896
C-terminal 461 669 208 0,9903
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-460
C-terminal
461-669

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_AttikonH1N2
[NCBI] 		3234957 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFD46899.1 [NCBI]
Genbank nucleotide accession
PP974226.1 [NCBI]
CDS location
range 41802 -> 43811
strand +
CDS
ATGGCACTGACTAGACTAGTAGACGTACGCACCCCTGTGGCTCAATTCCCCTCGGTAAATTCCCTGGATGAGTTGCGCGCGCTTTCGCCGCAAGTAGACGGGGATGCTGTAGTTATCAGGCGAGCTGTAGCTGGTGGGCCTTACGTCAACCACGTGGTTTATTATGATGCCGCGGATACCTCTACTCCGGATAATGGGTACTCTGTATTCGTAACCGCAGACGGTAAGCGATTTAAGGACGACCCCAGCGAGCCCATTAACCCGCTGCTAGCGGGATTCACTGTAACCGCAAATAACCTGGCGCAGTGTCTGAACACAGTTATCCAGGCGGAAGTAGCCCGCATCATTGCTCGCGGCGCTGTGAATGGTGGTATCCGTCCTATTAAGGTTCCGCACCTGCCAAACCTGGCTACCATCGATGGCGTTACGGTGTACAACATGACTGACACTGTACGCCAACCCAGCGTCTTGAGTATCGTACTACCTGAGCAAGGACTGTTTGAGTGGGCTGCATTCACCACCGGAACTGGTTGGGTTATCTCTAACGAGTTCACTGGCTTGACGCAAACTCTGATGTTCCGCAACAACGGGGGTGTGACGCAAGGGGCGAGTGCAAACCACCCGAACCTGGCTCTCGATGGCAGAAACAGCATGTTCCGTGGACCTGGTTATAACTTGACTACGTTCCCGGGGCTGCGGGTGGGTAACGTCACGTACCCTAGTGGTTCGTACGCGCATTGCCGTGACGCCTCTGTGGAGAACCTGCGTATCGCTGGGTTTGAGTCCGGATTACGTTTAGGCTCTGTGGACACGTACCTGCTGCGCTTCCGCGGTCTAGACCTTACCCGGAATAAACACGCGCTCAGCACCGCCACGAACTTTACCGGCAGCGTTTATCAGTGGGCCAACTCCGGAGAAAACATCCGATTTACCGAGTGTATCTTTGGGGATAACTACAGCCATGCCATTAGCCGCAATGACCGCGGGCACCTGATTACGTACGTAGGCTGCAGCTTCGACTACAACGTGGGGGACCTGTTCTACTACGGCTCTCGTCATATTGGTAAGGACATCATCATTGGCGGTCATATCGAGGGTGTAAGCGGACTCCTAGCGAACTTCCCTGTTCAAGATGCTACGGATGGGCAGATTACGTTGAAGATTCAACTGCCAGAGTACTTTGCTGCGCGCAACGTAGGGGACCCCTATGCTGGTATCCGGAACCTGGTGTTTGGTATCAGTAACCGCCTGAACGTGGATATTGACGATATGTCCTGGTTCCACCGTGCCCCGTACGTGAACAACGCCTACGGTATGGTGAAGGACTTATCAGACCCCAATAACCGTGCACGTATCAAGGTGCAGTATCCGTTGGCCGCGCAGTCGTACCGGTATATGCCGGGTATCGAGTACCGTATCAATAACACGTTCACCTTTACCGGCACCCCTGGGGACCCTTTACCCTCCTCCCCTGCCGGTGGGACGTTCTTTGCTATCCGTACTGGTGCAGCTACGGTGGTGTATGGTAGTGCGGCAGATGCCGATGCAGATGGCTACATCCCGGTGCTAATCACTATGGGGGCTACCTCTGACACGGTGCAGCTGATGTATAACAAACCTCTCTACTACGGGCGGGATGTTAAGCAGTTGTATGGCAAGTGCTCCATTAAGGCTGGTACTGCTACGGGTGTAGTGGGTATGCAGACGTGCGCCCGAGTCATTGGCTCTGTGACGCGCACTGCTAACTTGACTACCGGTGCAGTTACGGATACGGAGGTGCTTGCTGCGGTGCCTACTAGCGCCTCTCAGGATATTCTCAATAGCCTGAGTAAAGACGCTATAACTATCACTGCGAATGACTATATGAGCACTTACCCTGTGCCGTGCAGTCTCATCGGCGGTATTTATGCGTACATGGGCCTGCGCTTCACTGGGTTCACAGGTACTATCGCTGTGAAGCTCCCGTTGTGGTGGTTCTCGGACGAGCACCCGGAGCAGGGGTACCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e212ef5ce9f71955494ae891f3190e89a768a6a94f9f7feef948cda41760d101
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7281
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against carbapenemase-producing K. pneumoniae clinical isolates Paranos,P., Siopi,M., Skliros,D., Zrelovs,N., Svanberga,K., Kazaks,A., Flemetakis,E. and Meletiadis,J. 2024-12-22 — GenBank