Phage RBP Database

Genbank accession

XQM40146.1 [GenBank]

Protein name

stabilization protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Seq2Symm

C6 confidence 0,485

C6	0,485
C3	0,008
C1	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAYVTTSYGRPIQGVSQQPDRIRLEGQCTLQENFIPDVVKGLTKRPATYFVGKVADKAVSSMAKFHSYDRGDESYFMFIEPQSNSISVFNAKGEQQIVNGDVAYISCTEPAKQLDMRTIGDFTFITNKTVPVRMTGEKSPEQSTTGIVYCQYASYGKDYKVMAGNSTLAAFKTPDGSDPSHIYEVATDNVARKLYQQIHGDPAGSPPIPANPYYDAELHGNVIYITKRDGGDFKLSTSDSQKGEDLIAAKGSVKSVNQLPPIAPDGFVLRITGEGKSTKDDYWLKAVVSNDSKVRWVETVQPGVLIAFDADTMPHVLIRESISNGVATFTLKKADWDTRQVGGEDSNPLPSFIDEANPIPIQATGVFQNRLFFLSGEAWIASRSNLFFNFWRESTQAEVDTDPIDGYADTDRVNNLYQYQILNGSLAIFADQAQFIIDGSKPVTKANLTLQQVTAYPNNVHVQPQAGGENIFFAYDASGYTGIRELFTDNYTDTKKAYPITDYVSKYLNGQCIQLLASANFNSMMVRTDASLSEVYVYDWLWQAEQKVQSAWHKWILDGDVLFLFYLEDRMYAVYSKGGSTYVDYLHMVNDPADRGLDYSIKLDHKLTVPAVYDSSRKTYTMQLPFVRDDVVFTVGTGGHSTLSGSAFVATSLGGGKWETAERISDQSDLSVVCGIKYKSRYIPTQPVVKDMRDRVIGLDSIIMSNMYVHYELTGFLEILVKPKQGQPREYRFFGRWMGSANNLVGSPKLENGTYRAPIRQRAEDLQITIQSDSHYPLTVRDIEIDGTFHQRGQRI

Physico‐chemical properties

protein length:	796 AA
molecular weight:	88975,90030 Da
isoelectric point:	5,46594
aromaticity:	0,11181
hydropathy:	-0,36658

Domain architecture

XQM40146.1

1 796 aa

TTP 1–796

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058003
TTP

IPR058003

XQM40146.1

1796 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058003	TTP	DC_0684	1	796	InterPro cluster	Tail tubular protein gp12	Central	High	Text match	1810 proteins / 1902 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XQM40146.1

1 796 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	137	137	0,9933
Central domain	138	336	200	0,1679
C-terminal	337	796	459	0,2261

Note: Constraints were applied during segmentation.
Fixed 6 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Edwardsiella phage vB_EtA_DT115P1 [NCBI] · taxon 3403433

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

XQM40146.1 [NCBI]

Genbank nucleotide accession

PV165918 [NCBI]

CDS location

range 10793 -> 13183
strand -

CDS

ATGGCATACGTTACTACAAGCTACGGCAGGCCTATCCAGGGTGTGTCGCAGCAGCCTGACCGTATCCGTTTAGAGGGTCAATGCACGCTGCAAGAGAACTTTATCCCAGATGTGGTTAAGGGGTTAACTAAGCGCCCTGCTACTTACTTTGTTGGTAAGGTGGCTGATAAAGCTGTCAGCAGCATGGCTAAGTTTCACTCCTACGACCGTGGTGATGAATCCTACTTCATGTTCATTGAGCCGCAGTCAAATAGTATCAGCGTGTTTAATGCTAAGGGTGAGCAGCAGATTGTCAATGGTGATGTAGCTTACATCAGCTGCACTGAGCCAGCTAAACAACTAGATATGCGCACTATTGGTGATTTCACCTTTATCACTAATAAGACTGTTCCTGTGAGAATGACAGGGGAGAAGTCACCAGAGCAGTCCACCACAGGTATTGTGTACTGCCAGTACGCCTCCTACGGGAAGGATTATAAGGTGATGGCTGGTAACTCAACCTTAGCTGCCTTCAAGACCCCAGACGGGTCTGACCCTTCACACATCTATGAAGTTGCAACTGATAATGTGGCAAGAAAGCTCTACCAGCAGATACATGGCGACCCAGCCGGATCCCCACCAATTCCTGCTAACCCTTACTATGATGCAGAGCTACATGGTAACGTTATCTACATCACCAAGCGTGATGGAGGTGACTTCAAGCTGTCAACAAGTGATTCCCAAAAAGGGGAAGACCTGATTGCCGCTAAAGGCTCAGTTAAGTCAGTTAATCAGCTGCCACCCATTGCACCAGATGGCTTTGTCCTGCGTATCACAGGAGAGGGTAAGTCAACTAAAGATGACTACTGGCTTAAGGCCGTTGTCAGTAATGACTCCAAGGTCAGGTGGGTGGAGACAGTTCAACCAGGTGTCCTGATTGCTTTCGATGCAGATACGATGCCGCATGTACTTATCCGTGAGTCTATCTCAAATGGTGTGGCTACCTTCACGCTGAAGAAAGCTGATTGGGATACACGACAGGTTGGTGGTGAGGATAGCAACCCTCTCCCAAGCTTCATCGATGAGGCCAATCCAATCCCTATTCAGGCGACTGGAGTGTTCCAGAACAGGCTATTCTTCTTGTCAGGTGAGGCTTGGATTGCATCACGGTCTAACCTCTTCTTTAACTTCTGGAGGGAGTCAACCCAAGCAGAGGTTGATACTGACCCAATTGATGGGTATGCAGATACTGACCGTGTAAATAACCTTTACCAGTACCAGATACTTAATGGCTCGCTGGCAATCTTTGCAGACCAAGCTCAGTTTATTATTGATGGCTCTAAGCCAGTTACAAAAGCTAACCTTACGCTACAACAGGTTACTGCATACCCAAATAACGTGCATGTACAGCCTCAAGCTGGCGGTGAGAATATCTTCTTTGCATATGATGCTAGTGGATATACAGGTATCCGTGAGCTGTTTACTGACAACTATACGGATACCAAGAAGGCTTACCCAATAACTGATTACGTTAGCAAGTACCTTAATGGGCAGTGCATACAGTTACTTGCATCAGCTAACTTTAACTCCATGATGGTTAGGACAGATGCAAGCCTCTCAGAGGTGTATGTATATGATTGGCTGTGGCAAGCTGAGCAGAAGGTGCAGAGTGCTTGGCACAAGTGGATATTAGATGGTGATGTGCTATTCCTCTTCTATCTAGAGGATAGGATGTATGCCGTGTACAGCAAGGGTGGTAGTACTTATGTTGACTACCTGCACATGGTGAATGACCCAGCTGACAGGGGATTAGACTACTCTATAAAGCTAGACCACAAGCTGACTGTGCCTGCTGTGTATGACTCATCCAGAAAGACTTACACAATGCAGCTCCCTTTTGTGCGTGATGATGTTGTGTTCACAGTGGGAACTGGTGGCCACTCAACTTTAAGTGGCTCAGCTTTTGTAGCGACTAGTCTGGGTGGTGGCAAGTGGGAGACAGCTGAGCGCATCTCAGACCAGAGTGACCTTAGTGTGGTATGCGGCATCAAGTACAAGTCACGGTACATTCCGACACAACCTGTGGTAAAGGATATGCGCGATAGGGTAATTGGTCTTGATAGTATCATCATGAGCAACATGTATGTTCACTATGAGCTTACTGGGTTCTTGGAAATACTGGTTAAGCCTAAGCAGGGTCAGCCACGTGAGTACCGCTTCTTTGGGCGGTGGATGGGTTCAGCTAATAACCTAGTTGGCTCACCTAAGCTAGAGAATGGCACTTACAGGGCACCTATACGTCAGCGGGCGGAGGACTTACAGATTACGATTCAATCTGATAGCCACTACCCCCTAACGGTTAGGGATATTGAAATTGACGGCACCTTCCACCAGAGGGGGCAACGTATATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)