Protein

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Genbank accession
QQM14946.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MPLYTQSIKNLKGGISQQPDILRFQDQGETQINGWSSESDGLQKRPPTVFVKRLAKQRATPITDVSKFHLINRDETEQYYIVFTGTNILVFDLEGNPYTVTGAMDYVTTSAPRDDIRVVTVADYTFIVNRKKVVKEGTTKAHAGYDMKHRALINLRGGQYGRTLTVSINGGTKVEHKTPAGNDAENDPPKVDAQYIGDALRTLLVAAYPGWTFNLGSGYLEIVAPSGTSINSVETTDGYANQLITALIDTVQTISKLPLAAPNGYIIRIQGETNSSADEYYVMYDSSRKTWRETVEPGVTTGFDVATMPHALVRKSDGNFEFKTLDWSQRGAGNDETNPMPSFVDSTINDVFFYRNRLGFLSGENVIMSRSAGYFAFFPKSVATLSDDDPIDVAVSHPRISILKYAVPFAEQLLLWSDEVQFVMTSSGVLTSKSIQLEVGSEFAVSDEARPFAIGRSVFFSAPRGSFTSINRYFAVADVSDVKDADDTTGHVLSYIPNGVFDIQGSSTENFITVTTTGENSRVYIYKFLFKDGVQLQASWSHWEFENGDMIMATACIGSKMYIVRKHSWGVDLERLEFIKQATDIAGEPYRFHMDGKTVLTIPSDAYNVNANTTTFDMKLGFADEWPSPGRFIMADSTGAYIMLPEQSWDTTTNVTVKGDWSGRTVFIGRVYTFTYGFSRFLIKHEDQNGTITEDSGRLQLRRAWVNYQQTGALIMKVKNQYREFLNTLNGYKLGQQKVGEVSIGDGQFRFPMNGDAMNTRLILESDFPTPVAIVGCGWEASYARKAQSI
Physico‐chemical
properties
protein length:790 AA
molecular weight: 87949,78120 Da
isoelectric point:5,44190
aromaticity:0,11266
hydropathy:-0,29203

Domains

Domains [InterPro]
IPR058003
TTP
1–790
IPR058003
QQM14946.1
1 790
Architecture
TTP
TTP 1-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQM14946.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 131 131 0,9934
Central domain 132 330 200 0,1870
C-terminal 331 790 459 0,2362
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-131
Central
132-330
C-terminal
331-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CtuP_B1
[NCBI] 		2797305 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sp.
[NCBI] 		1888169 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM14946.1 [NCBI]
Genbank nucleotide accession
MW345254 [NCBI]
CDS location
range 3558 -> 5930
strand +
CDS
ATGCCACTTTATACACAATCCATTAAGAATCTGAAGGGTGGCATTAGCCAGCAGCCTGACATCCTCAGGTTCCAAGACCAAGGCGAGACCCAGATTAACGGATGGTCCTCTGAGAGTGATGGACTCCAGAAGCGACCGCCAACAGTATTCGTTAAGCGTCTTGCAAAGCAGCGAGCAACGCCAATCACGGACGTCTCAAAGTTCCACCTGATTAACCGTGACGAGACAGAGCAATATTACATCGTGTTCACCGGGACGAACATTCTGGTATTTGACCTTGAGGGGAATCCTTACACTGTGACCGGGGCAATGGACTACGTTACAACCTCAGCACCGAGAGATGACATCCGTGTCGTTACGGTGGCTGACTACACGTTCATTGTGAACCGTAAGAAGGTCGTCAAGGAGGGAACCACTAAGGCACACGCTGGGTATGACATGAAGCACCGGGCGCTGATTAACCTCCGTGGTGGACAGTATGGTCGAACTCTGACAGTCTCCATCAACGGTGGGACCAAGGTGGAGCATAAGACTCCTGCTGGTAACGATGCAGAGAACGACCCACCTAAAGTAGATGCTCAGTACATCGGTGATGCGCTGCGTACACTTCTGGTCGCTGCCTATCCGGGGTGGACGTTCAACCTTGGGTCTGGCTACCTTGAGATTGTTGCCCCTAGTGGTACCAGCATCAACTCAGTGGAGACGACTGACGGTTACGCCAACCAGTTAATCACAGCTCTGATTGACACAGTGCAGACTATCAGTAAGCTACCTCTGGCAGCGCCTAACGGTTACATCATTCGTATCCAAGGTGAGACCAACAGTAGCGCTGACGAGTATTACGTGATGTATGACTCTTCGCGTAAGACTTGGCGTGAGACCGTGGAGCCGGGTGTGACTACGGGTTTCGACGTGGCGACCATGCCTCATGCTCTGGTCCGTAAGTCCGATGGGAACTTTGAGTTCAAGACTCTGGACTGGTCACAGCGTGGAGCTGGTAACGATGAAACAAACCCGATGCCGTCCTTCGTAGATTCGACCATCAATGATGTGTTCTTCTACCGTAACCGCTTAGGTTTCCTGTCTGGTGAGAACGTCATTATGTCACGTTCCGCTGGCTACTTCGCGTTCTTCCCTAAGAGCGTGGCGACCCTGAGTGACGATGACCCGATTGACGTAGCTGTGAGTCACCCTCGAATCTCCATCCTGAAGTATGCCGTTCCGTTCGCTGAACAGTTACTTCTGTGGTCTGACGAGGTGCAGTTCGTGATGACCAGCTCTGGTGTCCTGACCTCCAAGTCTATCCAGCTTGAAGTCGGCTCTGAGTTCGCTGTGTCTGACGAGGCCCGACCGTTCGCTATTGGACGCTCAGTATTCTTCTCAGCGCCACGTGGCTCGTTCACCAGCATTAACCGTTACTTTGCGGTAGCCGACGTCTCTGACGTTAAGGATGCTGATGACACCACGGGTCACGTTCTGTCCTACATTCCCAACGGAGTGTTTGACATCCAAGGGTCCTCGACTGAGAACTTCATCACGGTCACTACCACTGGTGAGAACAGCCGAGTGTACATCTACAAGTTCCTGTTCAAAGATGGCGTCCAGTTGCAAGCCTCTTGGTCGCACTGGGAGTTTGAGAATGGTGACATGATTATGGCTACAGCCTGTATCGGGTCCAAGATGTATATCGTCCGTAAGCACTCATGGGGTGTGGACTTGGAGCGACTGGAGTTCATCAAGCAGGCTACTGACATCGCTGGCGAGCCATACCGATTCCACATGGATGGGAAGACAGTGCTGACCATTCCGTCTGATGCCTACAACGTTAACGCGAACACCACAACGTTCGACATGAAGCTAGGCTTCGCTGACGAGTGGCCCTCACCGGGTCGATTCATCATGGCTGACTCCACTGGTGCTTACATCATGCTGCCTGAGCAGAGCTGGGACACTACGACCAACGTTACCGTCAAAGGCGACTGGTCAGGACGTACAGTCTTCATCGGTCGAGTCTACACGTTCACCTATGGTTTCTCACGGTTCCTCATTAAGCACGAGGACCAGAACGGGACCATCACGGAGGACAGTGGTCGCTTGCAGTTACGCCGAGCTTGGGTAAACTACCAGCAGACCGGGGCGCTCATCATGAAGGTTAAGAACCAGTACCGAGAGTTCCTCAACACGCTGAACGGCTATAAGCTGGGACAGCAGAAGGTCGGAGAGGTAAGTATCGGAGACGGTCAGTTCCGCTTCCCGATGAACGGTGACGCAATGAACACAAGGTTAATCCTTGAGTCGGACTTCCCGACCCCAGTGGCTATCGTAGGCTGTGGCTGGGAGGCTTCATACGCTCGGAAAGCTCAATCCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac906fbc2c42a14c1144f3a78a3c72b613870b3d8056b273635a6d593104ed60
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3348
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel phage vB_CtuP_B1 for controlling Cronobacter malonaticus and Cronobacter turicensis in ready-to-eat lettuce and powered infant formula Zeng,H., Li,C., Luo,D., Zhang,J., Ding,Y., Chen,M., Yang,X., Lei,T., Wu,S., Ye,Q., Pang,R., Gu,Q. and Wu,Q. 2021 33992361 GenBank