Protein

View in Explore
Genbank accession
YP_007676557.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TSP
Evidence RBPdetect2
Probability 0,71
Protein sequence
MGLKSTFSTNEGKAEACAVDKYVNTAYDNMVIISDNIEALLEISDNLEYLTVYLGSYTTDPTERPDGTPLQDGDYYFNTLINALVYYDLAETNWFTVDPQELLDARDAAQAAQAAAETAEANALVSENNAAASELNASNSEAAALASEQAAAISEANASASETAAALSETNAAASEANALASENAAKASETAAALSETNAATSETNAANSASAALTSETNAAASETSAANSAVVAGGYAADAEAAFDNFNDLYLGAKTADPTLDNDGNPLQVGATYWNSVTNDLRYWNGVSWDIPEETAIQAANTAVAARDDAQISETNAAASAAAASTSETNAATSETNAATSEANALASEQAAALSETNAATSASNAATSEFNAAQSASDAAGSAASAAQSEANIDVAVTEAQNDIIGGSIFKGSNGEHVQNGDTVPSGTTHLRVEIGGEPTIVAMYPKSSGDVSSLSDDGATIGGTQVTFFKEIEKSVVYASNWIGLTTTNVTEKLIEMHKYAYENRLQVIYDGNFSLEVDLSKTSTSQGGTPIFVDSDTDFGGVTFSFKNASSVGGGDDDEFMRFDAQDLIDISGFVNISEFGYGSTYAPSLAAYEDAYIFINTTKDLVKRNPSDTEFRTYAVNNKVHRFGQLQYPVNYDCSDATGFKSAVLRPSKNAITIKGGIIDCTGVNNARLFVTARNNTTLDGIKCVRSDSPLNTSNNIFYFDRCCDITYKNMKPLGQNSSGTGTYGISGDGAVNLTLDNVSAVVGWGAMGTNYVNGLNVIGGYLSRVDVHFMGENIEVTRTQLKGLNIQVGIGGGYLKVKDVSVVLGKDPQRNIVDANRLIYIRPDYGSTWKGDIDIDGVSIRVAKEYDVVDTAFDMVQNVFSDNDTLVSPEIHYPFGMSLSAKNVSILVYPVGGFMGLELFNCGTVGPQQSRMMLPLKIEMESFKSITRNSEVPIVLSRTFSFIFDNDPQLHWAHTQSKSNYSGSDVEIFISDIDAIGTRPNGYISRDQQRNLLCFLSRSIDYDAHPNLPRFSVKGEKLSNLGFTWENQGDVDIDNSHIIGVWNNSNTTAIIKVTGSRCEVMKNPNGDNAYRRSFGICFENCIFIPSVGSLNDTLRTDNIVSASKCLVHKDVNLLTGAGMRTRQEMFDGFVDDPNGLVSLT
Physico‐chemical
properties
protein length:1152 AA
molecular weight: 122655,30290 Da
isoelectric point:4,35889
aromaticity:0,08160
hydropathy:-0,22387

Domains

View on InterPro
Domain architecture
YP_007676557.1
1 1152 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_007676557.1
1 1152 aa
Domain Start End Length (AA) Confidence
N-terminal 1 495 495 0,9971
Central domain 496 1140 646 0,9721
C-terminal 1141 1152 11 0,6780
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage VBP32 [NCBI] · taxon 754072
Uroviricota Caudoviricetes Schitoviridae Stoningtonvirus Stoningtonvirus VBP47
Host
Vibrio parahaemolyticus RIMD 2210633 [NCBI] · taxon 223926
Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio

Coding sequence (CDS)

Genbank protein accession
YP_007676557.1 [NCBI]
Genbank nucleotide accession
NC_020868 [NCBI]
CDS location
range 26733 -> 30191
strand +
CDS
ATGGGTTTAAAATCAACCTTTAGTACAAATGAAGGTAAGGCAGAAGCATGTGCGGTGGACAAATATGTCAACACTGCATATGACAACATGGTTATCATCTCTGACAATATTGAAGCACTGTTAGAGATCTCAGATAATCTTGAGTACCTTACTGTTTATTTAGGTTCGTACACTACGGACCCTACAGAGCGTCCTGATGGAACTCCATTACAGGATGGTGACTACTACTTTAACACACTGATCAATGCATTGGTGTACTACGACCTTGCTGAAACAAACTGGTTTACAGTAGATCCTCAGGAACTTCTCGATGCTCGTGATGCAGCTCAGGCTGCTCAGGCAGCGGCAGAGACGGCTGAAGCTAATGCTTTAGTATCTGAGAACAATGCTGCGGCATCTGAACTTAATGCTTCCAATAGTGAGGCAGCTGCACTTGCATCTGAACAAGCTGCTGCGATCTCTGAAGCTAACGCTTCAGCTAGTGAGACTGCTGCTGCACTAAGTGAAACGAATGCTGCTGCAAGTGAAGCAAATGCACTAGCCTCTGAGAACGCCGCTAAGGCCTCTGAGACAGCTGCAGCTCTGAGTGAGACCAATGCTGCCACTTCAGAGACAAACGCTGCTAACAGCGCTTCTGCGGCCCTCACAAGCGAGACTAATGCTGCTGCGTCAGAAACGTCTGCTGCTAACTCTGCTGTAGTTGCTGGAGGTTATGCTGCGGATGCCGAAGCTGCTTTTGATAACTTCAATGATTTGTACTTAGGTGCGAAGACGGCTGACCCTACTCTAGATAACGACGGTAACCCGTTACAGGTAGGTGCTACTTACTGGAACTCTGTCACTAACGATCTTCGTTACTGGAACGGCGTTTCATGGGATATCCCAGAAGAGACAGCAATCCAAGCGGCTAATACTGCGGTAGCAGCTCGTGATGATGCACAGATCTCAGAGACTAATGCGGCGGCTAGTGCTGCGGCTGCAAGTACTTCTGAAACTAACGCTGCTACTTCTGAAACTAACGCTGCTACTTCTGAGGCTAATGCTCTTGCTAGTGAACAGGCGGCAGCTCTTTCGGAGACGAACGCGGCTACTTCTGCATCTAATGCAGCAACCTCAGAATTCAACGCAGCTCAAAGCGCATCCGATGCAGCAGGCTCAGCAGCAAGTGCAGCGCAGTCAGAAGCAAATATTGATGTAGCTGTAACTGAAGCACAAAACGACATTATAGGCGGTTCGATATTTAAAGGGTCGAATGGTGAGCATGTACAGAACGGCGACACTGTCCCGTCGGGCACCACTCATCTTCGTGTTGAGATTGGTGGCGAGCCTACGATTGTGGCGATGTATCCTAAGTCCAGTGGCGATGTATCTTCATTATCAGATGATGGAGCCACTATTGGTGGTACTCAAGTTACATTCTTCAAGGAGATAGAGAAAAGCGTTGTTTACGCATCTAATTGGATTGGCTTGACGACAACAAACGTTACAGAAAAACTAATCGAGATGCATAAGTATGCCTACGAGAATAGATTGCAAGTAATATATGACGGGAATTTCTCACTGGAGGTTGACCTGTCAAAGACGTCTACATCTCAAGGTGGTACGCCTATTTTTGTGGACTCTGACACTGATTTTGGTGGTGTTACTTTTTCATTCAAAAATGCATCATCTGTTGGTGGTGGAGATGATGATGAGTTCATGCGGTTCGACGCCCAAGACCTGATTGATATTTCTGGATTTGTAAACATATCCGAGTTTGGTTATGGGTCTACGTATGCTCCATCATTGGCAGCGTATGAGGATGCGTATATCTTTATAAATACAACTAAAGACCTGGTAAAACGAAACCCTTCTGACACAGAATTTAGGACATACGCAGTTAACAACAAAGTCCATCGTTTCGGCCAGCTTCAATACCCCGTTAACTACGACTGCTCTGATGCTACTGGTTTCAAGTCCGCCGTACTTAGACCAAGCAAAAACGCCATAACAATCAAGGGAGGTATTATTGATTGTACTGGCGTTAACAACGCAAGGTTGTTCGTTACAGCAAGGAATAACACAACACTAGACGGAATTAAGTGCGTTAGGTCTGATTCTCCACTTAATACATCAAACAACATTTTTTACTTTGATAGATGTTGCGACATAACTTACAAGAACATGAAGCCACTAGGTCAAAATTCTAGTGGGACAGGCACTTATGGAATATCTGGTGATGGTGCGGTAAATCTAACTTTAGATAATGTTTCTGCTGTCGTCGGCTGGGGAGCCATGGGCACTAACTATGTTAACGGACTAAATGTCATTGGTGGTTATTTGAGTCGCGTGGATGTTCACTTTATGGGTGAAAATATAGAGGTAACACGAACTCAGCTTAAAGGCCTGAACATCCAAGTCGGAATTGGCGGTGGATACCTTAAAGTCAAGGATGTATCGGTTGTTCTTGGTAAAGACCCACAAAGAAATATAGTTGACGCTAACAGGCTTATATACATTCGCCCTGACTACGGAAGCACATGGAAAGGCGACATTGACATAGATGGTGTTAGTATACGTGTCGCCAAGGAATACGACGTTGTGGACACTGCTTTCGATATGGTTCAGAACGTATTCAGTGATAATGACACCCTCGTCAGTCCCGAAATTCATTACCCGTTTGGTATGTCGCTATCAGCTAAGAATGTGTCAATCCTCGTTTACCCTGTTGGTGGATTTATGGGTCTCGAATTATTTAACTGTGGAACGGTCGGGCCGCAGCAATCAAGAATGATGCTTCCACTAAAAATTGAGATGGAATCATTCAAATCAATAACCAGAAACTCAGAAGTTCCAATTGTCTTGAGTAGAACTTTTAGTTTTATATTCGACAATGACCCACAACTTCATTGGGCGCACACTCAATCAAAATCTAACTATAGCGGTTCTGATGTTGAGATTTTCATTTCTGATATAGACGCAATAGGAACAAGACCGAATGGATATATATCTAGAGACCAGCAAAGAAACCTTCTTTGTTTCTTGAGTAGAAGTATAGATTACGACGCACACCCGAACTTGCCTAGATTCTCCGTGAAAGGTGAAAAGCTCTCAAATCTAGGGTTTACATGGGAGAATCAAGGTGATGTTGACATAGACAATAGCCATATTATTGGAGTTTGGAACAACTCGAACACCACAGCCATAATCAAGGTTACTGGCAGTCGGTGCGAGGTCATGAAGAATCCAAACGGAGACAATGCGTACAGAAGGTCATTTGGTATATGCTTTGAGAATTGTATTTTCATCCCTTCTGTTGGGTCATTAAACGACACATTGCGTACTGACAATATTGTTTCTGCAAGTAAATGTCTGGTGCATAAAGATGTGAACCTGCTTACTGGCGCTGGAATGAGAACAAGACAGGAAATGTTCGATGGTTTTGTAGACGACCCAAATGGTTTGGTTTCACTAACATAA

Genome Context

Tertiary structure

YP_007676557.1
ESMFold structure
Source ESMFold
pLDDT 57.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage VBP32 Henn,M.R., Wharam,S., Gilg,I., Martinez Martinez,J., Wilson,W., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank