Phage RBP Database

Genbank accession

AFQ96704.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

Seq2Symm

C3 confidence 0,741 truncated

C3	0,741
C1	0,127
C2	0,008

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAKKGRDDFDDLDLDRMDDWDDFGEPPRNTDKSRNPIMDTLRVARKSALSTIWPKGKRDQVILKGLPKPAADAYDGYQNVAAAGKDIVAHTKDELVKTERMIKQQARQLGPTLKRYLPDAMTRKIDKWAKSDQVEYNNYDPKQAMMDRELGEVFGGGGPTEEQQRDMREVATEDRIRDSVQQMKSDAMFQTVIGIAKDISLTTSLHRGVFLNVQRKQLELQYRTLFALQDLAKLKQDEFDRNTPALEAIQKNTALPDYAKEEFSEVHWANVKRKAAEWINPLKHADGFIDQIRENAKKKISNAFGEGRGMLEQLLGMGVEDDFGMDDSSSLTAEKRKTNARDKTVGWGSGWLAKKLLGPQIEKLQKWSREELEKNPEVMKRLQAGKFNFQNLSSISNSAIAGESEGPLADIFRFLNEMGIVQPLNREKAFLDERDGAAMQRSAKFDRKAHLTLTEIIPAWLSEINKSIRRGYGEHADMEYDITSRGFVDRKVIGNRVRKAVANDEQRLRLQGSINKTVDFIDDKGELSAKERQHLADYVESRASQGRAFDVGAILKDSSHLMRHMGGNGSEKLQGILQRRSEGLTGGHAELSNELASRIATIQSSITARQSMIDEAANIYGERALRDAGIFNYDAKSDVFAVDKDLSDPYTLFNNLAMGKTRTGRALTRDQEIAKKLQNGSALGDYLRRMGAGSGGPADDDTSLPPGLGGKGKGKGGKGLNPRQLAAVLYGETSTNFVELLSQRNQAQDQSGQTDRVVAAIRESSNLSVVQKILEHVKSMDEEGVLLASLAGGGGPGGDGSDDIQGPPRPPRGGPGGGGRRRRIIIGEDGLLRRWGGVLFDSAAGMGRFAGRLGKGAKDRLGKFGSWARGKFGGGEGPGILSKIRGLVTGGFEGAWNSASGFVKGTLGIRDIFDEKGNVVLQGAKLEAGEYYQVSSGSGAKMKQLKTLDDIRLGRDIVDEAGNLILAAADLAKAGKLRYYKGGKAQALFQILAQKAGTGVNKIVKLPKRLLDFISPKAGSFMTKVKDWLNEIPEGEEKSRIQAAFSRVTSLPKKVWDVAKNGWDKFKDMAQNNPLTRWWQNREGGGGGGISLFSMSNARKTNHILIRIYKLLNKRLAGEAEDEGWTEQMEKNVGGGRGLRGQAAQALRRAKVMARRRFGKRWGRFRGRVGDGMDTVRDEFGNVVERGNNIVDSFRGSRHDIATRYEVARRLAGRDDDVADFYRDHLNARGGISGKKVKSAIKDDVDKVKGAAADVIGSAADKSRSLGSRLLDRMSRMVDLQEMSWFNTMRDSVEKAGGSDGLLRTMFSKFGRRNKPKESDEKRDYFSFFRRRRRTKEEEEAAAPPKRGGKKGGIMDMLKGLPLIGPIVSILGTVGSILGTVAKWGIFKPAALVGKAAWQVGKFAVTRAIPAVATGLYTAASAVVAAVGWPAIAIGAAVVGASWLAYHIATYKAALRLDKMRLAQYGYRNNDAWSSDDGAKARFLEDNIKQYISYDDKGQATLRGMAAKDVEKLAEGYGVNLEEKGEMLAFQAFMLQRFVPVYLRWVTALKSMDNDIQLADVADQSKTSKADQKRLWAKVKMSKDANAFHALTDPRKVNQGFFSKAWDAITFTSPDLLDADEVMKVQDRVGKEIDWLVDDKIAEKKGMREAVDGVKSASVAESTQKLAALDKARNDNTIKTQGWEDGTEQVQIQVDWNAVADKKDLDALESLRWKTYGLVTIDSAARTQLNLFEKEVIKDVDTKSASYKGDWKKAVAVLAPDAIGGPKEDRYKLWFFSRFLPAFMTFLVGVKRYLPAGDPLNLKMTGGYLYEIALLVRGAYNLKGGVRQSVWEIPFNPLGGEANTDPRTVDKELETLRVLSKEADLAVRNLLKETQSAGKRAQWQRRDKNTNFFQTSGDDPQSKFFETYGKGSDAANRANGYAAAPGFNGTPNDLSQSVDAVGGIENYAKMTTGQSGISLGEVQAGDYKSLAEKYPIEKLGRRGALNVQAIQSMIVDAAKMFGVPPAVALAMAKAESSYDYTVTNSAGSAGGLFQFINGTWGDMMKGHGNKFGIPNKLNRNGGQLDPWANTLLGMQFIRDNIASAQRDLGGAAPPPAVAYLYHFLGAGGGKLFLKAWQKNPTAPSARAPGITAAILSGNKGVFYDGQGRNRTIGEVIQELNRRMGAVSANVMSAAPGMTADLTKNLSPANPAVAAGAANDPSIAGAADDLPADNAARRDDALDAKGAQAAADAQATASGNAGPAVPSPGAGTSGGDASTTADGVAAAAAADGLSPTDVAKVKAGAEKQLQKAAQQPAANSSDATASTPTLNTVPVDVQQLNVLKESAGYLKEIRDYMKANPGRGLSTGGNQAQAQGQAPAGSASRQQPITQPAPSLNVQRKVG

Physico‐chemical properties

protein length:	2382 AA
molecular weight:	258799,68100 Da
isoelectric point:	9,46275
aromaticity:	0,07053
hydropathy:	-0,51490

Domain architecture

AFQ96704.1

1 2382 aa

STR 1990–2089 · RBD 2090–2166 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:1.10.530.10
RBD

G3DSA:1.10.530.10

IPR023346
STR

IPR023346

IPR008258
ENZ

IPR008258

AFQ96704.1

12382 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0124
STR

DC_0124 DC_0301

AFQ96704.1

12382 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	1983	2166	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR023346	STR	IPR023346	1990	2089	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
IPR008258	ENZ	DC_0010	1993	2086	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits

Proteins with similar domain architecture

Phage

Erwinia phage phiEaH2 [NCBI] · taxon 1029988

Uroviricota Caudoviricetes Chimalliviridae Erskinevirus EaH2

Host

Erwinia amylovora [NCBI] · taxon 552

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)