Protein

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Genbank accession
YP_009783898.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAYSNLSFVRHVGDGVKTLFPLTVAGENMGYFRVEDIHTYVDDKEVPNVIQSQSPHIVSITPAPPAGSDVLIRREMPIEKPYADFSRGNNFGHRQVNNSFLQQLYLTQELIDGFTPKGFYMKQNVDYGGHVPKNLGDAVDPDDAVKKSVTDSLDNRLSNVEASTNVSSVNFLVPFTRTAAGGEVLINTGYSFNYCELSINGVEQIPSKSFNYMNGILYFAEPLEEGDEVFAKLGSLEKFAIGSSFSDYRHTAVGGEYSFPAPEHDFTALFINGVYQAPSYSYVIVGNNVHLAESLEEGDVVDLWYAEKPNT
Physico‐chemical
properties
protein length:311 AA
molecular weight: 34387,82680 Da
isoelectric point:4,68384
aromaticity:0,11897
hydropathy:-0,26302

Domains

Domains [InterPro]
IPR005604
ATT
1–113
IPR005604 DC_0397
DC_1609
STR
6–261
DC_1609
YP_009783898.1
1 311
Architecture
ATT
STR
ATT
ATT 1-113 | STR 114-240 | ATT 241-311
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009783898.1
1 311
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,9941
Central domain 307 306 1 0,4436
C-terminal 307 311 4 0,7868
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-306
C-terminal
307-311

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage AS51
[NCBI] 		1434127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009783898.1 [NCBI]
Genbank nucleotide accession
NC_047737.1 [NCBI]
CDS location
range 34757 -> 35692
strand +
CDS
ATGGCGTACAGTAACCTCTCGTTCGTTCGCCACGTAGGGGATGGGGTTAAGACTCTGTTCCCTTTAACAGTGGCTGGCGAGAATATGGGGTACTTTCGTGTAGAAGATATTCATACTTATGTAGATGATAAGGAAGTACCCAATGTAATACAATCACAATCACCTCACATCGTTAGCATTACACCAGCACCTCCTGCTGGCTCTGATGTGCTAATTCGTCGTGAGATGCCTATAGAAAAGCCATATGCAGATTTCTCTCGTGGTAACAACTTTGGGCACAGGCAGGTTAACAATTCATTCCTACAGCAGCTCTATCTGACACAAGAGCTTATTGACGGGTTTACACCTAAAGGATTCTACATGAAACAGAATGTAGATTATGGTGGTCATGTACCAAAAAACTTGGGAGATGCAGTTGACCCTGATGACGCAGTTAAGAAGTCTGTTACAGACTCACTTGATAATCGTTTATCTAATGTCGAAGCATCAACTAATGTGTCTTCAGTAAATTTCCTAGTGCCATTCACGAGAACAGCAGCAGGTGGTGAGGTTTTAATCAATACTGGTTATAGCTTCAACTACTGTGAGCTTTCTATTAATGGCGTTGAGCAGATACCTTCAAAGTCTTTCAATTATATGAACGGTATTCTTTACTTTGCAGAGCCTCTTGAAGAAGGTGATGAAGTATTTGCTAAATTAGGCTCACTTGAGAAGTTTGCTATAGGTTCTTCTTTCAGTGATTATAGGCATACTGCTGTAGGGGGGGAGTATTCTTTCCCCGCACCAGAACACGACTTTACGGCTTTATTCATAAACGGAGTATATCAAGCTCCTTCATATAGCTATGTTATCGTAGGTAATAACGTGCATCTAGCTGAATCACTTGAAGAGGGTGATGTTGTAGACCTATGGTATGCCGAGAAACCTAATACCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2aadb20a0752e0c43f7306309f6b9d14d63e4e7c7ab7cb9cac3d623f9b09c8dc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50