Phage RBP Database

Genbank accession

YP_009783898.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,56

Protein sequence

MAYSNLSFVRHVGDGVKTLFPLTVAGENMGYFRVEDIHTYVDDKEVPNVIQSQSPHIVSITPAPPAGSDVLIRREMPIEKPYADFSRGNNFGHRQVNNSFLQQLYLTQELIDGFTPKGFYMKQNVDYGGHVPKNLGDAVDPDDAVKKSVTDSLDNRLSNVEASTNVSSVNFLVPFTRTAAGGEVLINTGYSFNYCELSINGVEQIPSKSFNYMNGILYFAEPLEEGDEVFAKLGSLEKFAIGSSFSDYRHTAVGGEYSFPAPEHDFTALFINGVYQAPSYSYVIVGNNVHLAESLEEGDVVDLWYAEKPNT

Physico‐chemical properties

protein length:	311 AA
molecular weight:	34387,82680 Da
isoelectric point:	4,68384
aromaticity:	0,11897
hydropathy:	-0,26302

Domain architecture

YP_009783898.1

1 311 aa

ATT 1–113 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604

YP_009783898.1

1311 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1609
STR

DC_1609

DC_0397
ATT

DC_0397

YP_009783898.1

1311 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	1	113	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_009783898.1

1 311 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	306	306	0,9941
Central domain	307	306	1	0,4436
C-terminal	307	311	4	0,7868

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (4 AA) is still below minimum (10 AA). Sequence may be too short.

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage AS51 [NCBI] · taxon 1434127

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Vibrio alginolyticus [NCBI] · taxon 663

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

YP_009783898.1 [NCBI]

Genbank nucleotide accession

NC_047737.1 [NCBI]

CDS location

range 34757 -> 35692
strand +

CDS

ATGGCGTACAGTAACCTCTCGTTCGTTCGCCACGTAGGGGATGGGGTTAAGACTCTGTTCCCTTTAACAGTGGCTGGCGAGAATATGGGGTACTTTCGTGTAGAAGATATTCATACTTATGTAGATGATAAGGAAGTACCCAATGTAATACAATCACAATCACCTCACATCGTTAGCATTACACCAGCACCTCCTGCTGGCTCTGATGTGCTAATTCGTCGTGAGATGCCTATAGAAAAGCCATATGCAGATTTCTCTCGTGGTAACAACTTTGGGCACAGGCAGGTTAACAATTCATTCCTACAGCAGCTCTATCTGACACAAGAGCTTATTGACGGGTTTACACCTAAAGGATTCTACATGAAACAGAATGTAGATTATGGTGGTCATGTACCAAAAAACTTGGGAGATGCAGTTGACCCTGATGACGCAGTTAAGAAGTCTGTTACAGACTCACTTGATAATCGTTTATCTAATGTCGAAGCATCAACTAATGTGTCTTCAGTAAATTTCCTAGTGCCATTCACGAGAACAGCAGCAGGTGGTGAGGTTTTAATCAATACTGGTTATAGCTTCAACTACTGTGAGCTTTCTATTAATGGCGTTGAGCAGATACCTTCAAAGTCTTTCAATTATATGAACGGTATTCTTTACTTTGCAGAGCCTCTTGAAGAAGGTGATGAAGTATTTGCTAAATTAGGCTCACTTGAGAAGTTTGCTATAGGTTCTTCTTTCAGTGATTATAGGCATACTGCTGTAGGGGGGGAGTATTCTTTCCCCGCACCAGAACACGACTTTACGGCTTTATTCATAAACGGAGTATATCAAGCTCCTTCATATAGCTATGTTATCGTAGGTAATAACGTGCATCTAGCTGAATCACTTGAAGAGGGTGATGTTGTAGACCTATGGTATGCCGAGAAACCTAATACCTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)