Phage RBP Database

Genbank accession

XAG96615.1 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 1,00

Seq2Symm

C1 confidence 0,998

C1	0,998
D2	0,006
C3	0,004

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTNGWMYFIDFDQFGIKDDGTDATSTTSGFVAAFKRAVELGHSAVYVPEGTYLIDAVGVGDYLPEYGGGLQFPSNIEVILHEKALFKVQPNDSTGYACFNLEGVENVTIRGGHIVGDRHEHNYRQDVNENRRTHEWGFGIQVRGSKNVTIEDVTIEDCTGDNIWVTSKGMMNWPGVYIPSESVTIRKCRTFRGRRNNIAAGASVGLLIDDCDIIEAGGDEIGPQLGIDLEGYADNSIKYQHPYEINVINCRFKDNGRGSMNINVSGKVNAIGNFCDDYIGYGFSTDVTISNNVITNETGVHKKFGIDSIRKSTSETANRAVITGNVIRGFQTGIAARGKTVTVSNNILEDISSIGIYPYLCDQAVVSSNIIDSDCLHIWVRESKDIKVSDNKGTGAANNVSIKVDASKDVLLSDNEVSGKGGVRVSRSTNVRIVDNDIDMIGPDYGIYFDKQSEVHLRDNLVKNAAFTAIRGYADQYSSYIKGNIIQDCKYMIAIHIDGGSKHMIKDNDITFRRGSNAGYGVYLIGANDSRLHNNDIRVMDGFGLINSFYTIQSTNTKLIGNTYDTGEMKTNDTDFLRYNEKLPK

Physico‐chemical properties

protein length:	585 AA
molecular weight:	64447,16860 Da
isoelectric point:	5,33124
aromaticity:	0,08889
hydropathy:	-0,35009

Domain architecture

XAG96615.1

1 585 aa

STR 12–581 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334 IPR011050

IPR011050
STR

IPR011050 IPR006626 IPR006626 IPR006626

IPR051550
Unmapped

IPR051550

IPR006626
Unmapped

IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626

IPR039448
ENZ

IPR039448 IPR007742

IPR012334
STR

IPR012334

XAG96615.1

1585 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0453
RBD

DC_0453

XAG96615.1

1585 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	12	373	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	29	418	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR051550	Unmapped	-	86	539	InterPro	SCF Complex Subunits and Alginate Epimerases	-	-	-	-
IPR006626	Unmapped	-	104	144	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	135	273	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	145	167	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	180	202	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	203	231	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	242	264	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	284	310	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	317	337	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR007742	CBM	DC_0096	336	510	InterPro cluster	Periplasmic copper-binding protein NosD-like, beta helix domain	C-terminal	High	Text match	28 proteins / 31 hits
IPR006626	Unmapped	-	338	360	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	376	560	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	383	404	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	394	581	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	407	427	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	428	451	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	476	499	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	500	526	InterPro	Parallel beta-helix repeat	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XAG96615.1

1 585 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	23	23	0,9383
Central domain	24	574	552	0,9958
C-terminal	575	585	10	0,4413

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage KKP_4049 [NCBI] · taxon 3109402

No lineage information

Host

Bacillus licheniformis [NCBI] · taxon 1402

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Genbank protein accession

XAG96615.1 [NCBI]

Genbank nucleotide accession

PP579744.1 [NCBI]

CDS location

range 138525 -> 140282
strand +

CDS

TTGACTAATGGGTGGATGTACTTCATTGATTTTGATCAGTTCGGTATCAAGGATGACGGGACAGATGCTACATCAACAACTAGTGGGTTCGTAGCAGCGTTTAAAAGGGCCGTAGAACTTGGTCACTCTGCTGTATATGTACCAGAAGGTACTTACTTAATTGACGCTGTAGGCGTTGGTGACTACCTCCCTGAGTACGGAGGAGGTCTTCAGTTCCCGTCCAACATTGAAGTTATCCTACATGAGAAAGCCCTTTTTAAAGTCCAACCGAATGACTCTACCGGGTACGCTTGTTTTAACTTAGAAGGCGTAGAAAATGTAACAATCCGAGGCGGACATATTGTAGGTGATCGTCATGAACACAACTACAGACAAGACGTTAACGAGAACAGACGTACTCACGAATGGGGATTCGGTATCCAAGTTCGTGGAAGTAAAAATGTTACAATCGAAGATGTAACAATTGAAGACTGCACCGGAGATAACATCTGGGTAACATCTAAAGGTATGATGAACTGGCCGGGAGTGTACATTCCATCTGAAAGCGTAACAATCAGGAAATGTAGAACATTTAGAGGAAGACGAAATAACATTGCTGCCGGAGCAAGCGTAGGTCTACTTATCGATGACTGCGATATTATTGAAGCAGGCGGGGACGAAATTGGACCGCAGCTAGGTATTGACCTCGAAGGATACGCAGATAATAGCATCAAGTACCAGCATCCTTATGAGATAAATGTGATTAACTGCCGATTTAAAGACAATGGAAGAGGTTCTATGAACATCAACGTGTCTGGTAAAGTTAATGCTATCGGTAACTTCTGCGATGATTACATTGGTTACGGGTTTTCAACTGACGTAACTATTAGTAACAATGTTATCACAAACGAAACAGGGGTTCACAAAAAATTCGGGATAGACTCTATTCGTAAGTCTACTTCTGAAACAGCTAACAGAGCAGTTATTACTGGAAATGTAATTCGTGGATTTCAAACGGGTATCGCTGCTAGAGGTAAAACGGTTACTGTAAGCAACAACATCCTAGAAGATATTAGTTCTATTGGAATCTACCCTTATCTATGCGATCAAGCAGTAGTATCGAGTAATATCATAGACAGCGACTGTCTACACATTTGGGTTAGAGAATCGAAGGATATAAAAGTTAGTGACAATAAAGGTACTGGCGCAGCTAACAATGTATCTATAAAAGTAGACGCCTCTAAAGACGTATTACTAAGCGATAATGAAGTTTCTGGAAAAGGTGGAGTTCGAGTAAGTCGCTCAACAAATGTGAGAATTGTGGATAATGACATTGATATGATCGGCCCAGACTACGGCATCTACTTTGATAAACAGTCTGAAGTACATCTTAGAGATAACCTTGTTAAAAACGCCGCTTTCACCGCAATCAGGGGTTATGCAGATCAGTACAGCAGCTACATAAAAGGAAACATCATTCAAGATTGTAAGTACATGATCGCTATTCATATTGACGGTGGGTCAAAACATATGATTAAAGACAATGATATTACATTCCGCAGAGGGTCTAATGCAGGCTACGGTGTCTATTTAATCGGAGCAAATGACTCTCGTTTACATAATAATGACATTAGAGTAATGGATGGGTTTGGCCTTATCAACTCTTTCTACACGATCCAGTCTACGAACACTAAGTTGATAGGGAATACATATGATACAGGTGAAATGAAAACAAACGATACTGACTTCTTACGATACAACGAGAAGCTACCTAAGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)