Protein

View in Explore
Genbank accession
YP_010093471.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MTIRLQGILPDPFGNPCGKAVIRFTAEATEGGVLKGVDATHITLADGSYDFPLHEGRYLLEINYTDEFQESGSVVVDEFTPTDITLQALILYATPYTPPLVDDLPTHWETLFQNVIGSDEWDRQAEQQVRIEDKFVNEDKTIAKADESYLSKETLTTSTGSASAVNQTLAFEDNYGRSASYDKNEVSATDVSIKSGQEVYSDNAEVTAVQTTRLDASETSSETRKELTNQSVSTTSQDSVGDVTEALSKSLNNTEAKSTTTTSIGSDVITEKKYIDATTLVEALLEQNVVVENVEAFDRLKVTKDYSQRDIQVDTFNVGSTLSVDTKTDVVTVAGQLRLTNGDDYKGPVGDSAFYEYAYASQEEKDQNIWHIDSIDNPYPIPEGSVVWRKHRMVTIVDGVRTEGQWSEPYLLTGKDGEAGDTLYWDYKYKADNVLDDPDADYPAGWDATLLDGYLYRIERLVKDGVYQGSWSTPARIAGADGDNGELVYEEYMYSPQGVTKPDTEPSDWHYDFVTGDYYRSSRLVKYPAGTPLPIPEDLDPSLTTNWTNPTLITPRKGYEYVDGEQGTHGAGSYVLEWDDAYNSGNGYQNLVKTIEPVLTEAHVEFWYFQVVDRDSQSGDVLTIQQGNTSTPMQWLRGDTGWEDFVQVVDGNALFNGSVVAEKIKADTINGDHISATAKIIAGTGNNIGALDGIDSTYRIYAGHATPASAPFRVDQSGKMFSTSGQIGGWSIDGNSIYAGTKDTSGYTSGGITLYGNGNSSSFHSKEFYIDTAGNAYFKGSLSAADGTFSGTVYANKIDGDVTSGLVIDGNHTDATGGWTTHDVVNVNGSSEKTRRLVVQLNLYASASRSGTGNSGSVFASVQARMTGSFGTVYSDIVTTPGDYHTSTDGGTTSVSAQKMITLIGTVNANTTGTMTIQVRRVSGGGSSITTRVHGLATSSSSDTQIADLYIAQLIPSGSDLGT
Physico‐chemical
properties
protein length:963 AA
molecular weight: 104282,56040 Da
isoelectric point:4,40891
aromaticity:0,09242
hydropathy:-0,44112

Domains

Domains [InterPro]
DC_1333
STR
105–957
DC_1333
YP_010093471.1
1 963
Architecture
STR
STR 105-957 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.245.O._10N.261.54.C7
[NCBI] 		1881236 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010093471.1 [NCBI]
Genbank nucleotide accession
NC_055736.1 [NCBI]
CDS location
range 16601 -> 19492
strand +
CDS
ATGACCATAAGACTTCAAGGTATACTGCCTGACCCATTTGGAAATCCTTGTGGGAAGGCAGTTATCAGATTTACCGCAGAAGCCACCGAAGGTGGTGTGCTTAAAGGAGTAGATGCTACTCACATAACTCTCGCAGACGGCAGTTATGATTTCCCCTTACATGAAGGCCGGTACCTCCTAGAGATAAACTACACAGATGAGTTCCAAGAATCTGGTTCAGTAGTTGTCGATGAATTCACCCCAACAGACATTACCTTACAAGCCCTTATCTTATACGCTACCCCCTACACTCCACCATTAGTTGATGACCTCCCTACTCACTGGGAAACTTTATTCCAGAATGTTATTGGTTCAGATGAATGGGACAGACAGGCGGAGCAACAGGTACGTATCGAAGACAAGTTTGTCAACGAAGATAAAACCATTGCTAAAGCAGACGAGTCCTACCTCTCCAAAGAAACCCTTACTACATCTACTGGTTCGGCTTCTGCTGTTAACCAGACGTTAGCTTTTGAAGATAACTACGGACGAAGTGCATCTTACGACAAGAACGAAGTGTCAGCGACAGACGTATCTATCAAATCTGGCCAAGAGGTCTACTCAGATAATGCCGAAGTCACTGCGGTTCAAACTACTCGACTGGACGCATCAGAGACAAGCTCAGAGACACGTAAGGAACTAACGAATCAATCTGTATCGACTACATCTCAAGACAGCGTAGGAGACGTTACAGAGGCTCTCAGTAAATCCCTCAATAACACGGAAGCTAAGTCCACCACCACAACCTCTATTGGTTCGGATGTTATCACCGAGAAGAAGTACATCGATGCCACAACGCTCGTAGAAGCTCTCCTAGAGCAGAACGTAGTGGTAGAGAACGTAGAAGCCTTTGATAGGCTTAAAGTCACTAAGGATTATTCTCAGAGAGATATACAGGTAGATACCTTTAATGTAGGCAGTACTTTATCTGTAGATACCAAAACAGATGTGGTAACTGTGGCAGGCCAACTGAGGCTTACCAACGGAGATGACTACAAAGGTCCGGTAGGTGATTCAGCATTCTATGAATATGCCTATGCGAGCCAAGAAGAGAAAGACCAGAATATCTGGCACATAGACAGCATTGATAATCCTTATCCTATCCCTGAAGGCTCTGTGGTGTGGCGTAAGCATCGTATGGTAACCATAGTGGATGGAGTACGTACTGAAGGGCAATGGAGTGAACCTTATCTGCTTACAGGAAAGGATGGAGAAGCAGGGGATACTTTGTATTGGGATTATAAATACAAGGCCGATAACGTACTGGACGACCCTGATGCAGATTACCCTGCAGGATGGGATGCTACCTTACTGGACGGGTATTTGTATCGCATAGAACGTCTGGTCAAAGATGGTGTGTACCAAGGCTCTTGGTCAACTCCTGCGAGAATAGCAGGTGCAGATGGTGATAATGGAGAGTTGGTGTATGAAGAATACATGTACTCACCTCAAGGGGTAACCAAACCAGATACTGAACCTTCAGACTGGCATTATGATTTTGTGACCGGGGATTACTACCGAAGCTCGCGTTTAGTGAAATACCCTGCTGGTACTCCGTTACCTATCCCTGAAGACCTTGACCCAAGCTTAACTACTAACTGGACTAACCCTACCCTCATTACTCCCCGTAAAGGGTATGAGTATGTTGATGGCGAGCAAGGTACTCATGGGGCAGGAAGCTATGTTCTCGAGTGGGATGATGCGTACAACTCAGGGAATGGTTATCAGAATCTTGTTAAAACAATTGAACCAGTTTTAACTGAAGCACATGTGGAGTTTTGGTACTTTCAAGTTGTAGATAGGGATTCTCAATCAGGGGATGTACTGACTATACAGCAGGGTAATACTTCTACCCCTATGCAATGGCTACGTGGAGATACAGGGTGGGAAGACTTTGTACAGGTAGTAGATGGCAATGCTTTGTTTAATGGTTCAGTGGTTGCTGAGAAGATTAAAGCAGATACTATTAATGGAGACCATATCAGTGCTACCGCTAAGATAATTGCAGGTACTGGTAATAACATTGGTGCCTTAGATGGGATCGACAGTACGTACCGCATCTATGCAGGCCATGCTACCCCTGCTTCAGCCCCATTCAGAGTCGATCAATCAGGTAAGATGTTCTCTACGTCTGGGCAGATAGGTGGATGGTCTATTGATGGAAATAGTATTTATGCCGGCACTAAAGACACGTCAGGTTACACCTCAGGAGGCATCACACTGTATGGAAATGGTAACAGTAGTTCGTTCCACTCCAAAGAGTTCTATATTGACACAGCAGGTAATGCGTACTTTAAAGGTTCGCTAAGTGCGGCTGATGGTACGTTCTCTGGCACGGTTTACGCCAATAAGATTGATGGTGACGTGACTTCGGGGCTTGTTATTGACGGGAATCACACAGATGCAACAGGCGGCTGGACTACTCATGATGTTGTGAACGTTAACGGAAGCTCGGAAAAAACAAGAAGATTGGTGGTACAATTAAACCTTTACGCCTCCGCCTCCCGCAGTGGTACGGGTAACTCTGGAAGCGTGTTTGCGTCGGTACAGGCGAGAATGACCGGTTCATTTGGTACGGTTTATTCAGATATAGTAACTACGCCTGGAGATTACCACACCAGTACTGATGGTGGCACTACGTCAGTAAGCGCGCAGAAAATGATCACGCTTATAGGTACTGTGAACGCCAACACAACAGGTACAATGACCATACAGGTCAGGCGAGTGTCCGGTGGAGGATCCTCAATCACAACACGGGTGCATGGCTTGGCTACTAGTAGCAGCAGTGACACCCAGATAGCTGATTTATATATTGCACAGTTAATTCCTTCCGGTTCGGATTTAGGAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
224b967c3cca962eab4df569466dbf3603b13c6ae40258f3efb3013675f8d70e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5522
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank