Protein
View in Explore- Genbank accession
- XSD94455.1 [GenBank]
- Protein name
- base plate tail tube protein
- RBP type
-
TSP
- Protein sequence
-
MLYSLMRESRVVIEYDGRAYGFDALSDYTAGTSYEEFKANRRTIHKRSNYAYSKITAQSPSSISLTLNFSSNALEGLFFELMGFIEIDGMYQMPLFSNNIEPKMFSVYIINKNTSLRFDNCFATTCDFSLDKSVPVLNVGIESGYFEEVGHPLNSYTLDQGEVLPFSLPQVSSNGRVLPGLMSAGMSFQQQCEWRGDRSLFDINKIYNNRRAIVNELNSSALISMYYAKSLQIDSTHNIKPDIGLPVQIRNKYIVVDFPSTRITKRLDLTDVYKIDYDVIPTEQSDPVRIKLIGE
- Physico‐chemical
properties -
protein length: 295 AA molecular weight: 33559,69910 Da isoelectric point: 5,38734 aromaticity: 0,11525 hydropathy: -0,23458
Domains
Domain architecture
XSD94455.1
1
295 aa
ATT 1–294 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
XSD94455.1
1
295 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 286 | 286 | 0,7413 |
| Central domain | 287 | 286 | 1 | 0,5368 |
| C-terminal | 287 | 295 | 8 | 0,6021 |
Note: Constraints were applied during segmentation.
Fixed 69 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (8 AA) is still below minimum (10 AA). Sequence may be too short.
Fixed 69 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (8 AA) is still below minimum (10 AA). Sequence may be too short.
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Host
Klebsiella pneumoniae
[NCBI]
· taxon 573
Coding sequence (CDS)
Genbank protein accession
XSD94455.1
[NCBI]
Genbank nucleotide accession
PQ569711
[NCBI]
CDS location
range 9558 -> 10445
strand +
strand +
CDS
ATGCTATACTCCCTAATGCGGGAGTCTAGAGTAGTCATCGAGTACGATGGCAGGGCGTACGGATTTGACGCCCTGTCTGATTACACTGCTGGAACGTCCTACGAAGAGTTTAAAGCAAATCGTAGGACGATTCACAAACGCAGTAACTACGCCTATTCGAAGATAACTGCTCAGTCTCCTTCTTCAATTTCTCTAACTCTTAACTTCTCTAGCAATGCTCTCGAAGGTCTATTTTTCGAGTTGATGGGGTTTATAGAGATAGACGGAATGTATCAGATGCCCTTGTTCAGTAATAATATTGAGCCTAAAATGTTCTCCGTATATATTATTAACAAGAACACGAGCTTACGTTTCGATAACTGTTTTGCTACCACCTGCGACTTTTCTCTAGATAAGAGTGTCCCGGTGCTAAACGTTGGTATCGAGTCGGGATACTTTGAGGAAGTAGGCCACCCACTCAACAGCTATACGCTTGATCAAGGTGAGGTGCTACCATTTTCATTACCTCAGGTATCTTCGAATGGGAGAGTGCTCCCAGGACTTATGTCAGCCGGTATGTCATTCCAGCAGCAATGCGAATGGCGAGGTGACAGAAGTTTATTCGATATCAATAAGATTTATAATAATAGAAGGGCAATCGTTAACGAATTGAACTCATCCGCTTTGATATCGATGTACTATGCAAAGAGTCTTCAGATAGACTCTACGCATAACATTAAACCTGATATTGGCCTACCGGTACAAATCAGAAATAAATATATTGTGGTGGATTTCCCTTCCACTCGAATCACAAAACGCCTAGACTTAACCGACGTGTACAAGATCGATTATGACGTAATACCTACTGAGCAATCAGATCCTGTCCGAATCAAGCTAATTGGAGAATAA