Phage RBP Database

Genbank accession

ATE86504.1 [GenBank]

Protein name

proximal hinge connector of long tail fiber

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,40

Protein sequence

MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPYVKFQDNPVGSQTFSAGLHLRVFDPSTGALVDSKSYAFSTSNDTTSAAFVSFMNSFSSNRLVAILTSGKVNFPPEVVSWLRTAGTSAFPSDSLLSRFDVSYAAFYTSSKRAIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPKRTYESVEQFMSAVGGTNNEIARLPTASAISKLSDYNLIPGDVLYLKAQLYADADLLALGTTNISIRFYNASNGYISSTQAEFTGQAGSWELKEDYVVVPENAVGFTIYAQRTAQAGQGGMRNLSFSEVSRNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKTGKVFGQEFREV

Physico‐chemical properties

protein length:	371 AA
molecular weight:	40097,33560 Da
isoelectric point:	5,27076
aromaticity:	0,11321
hydropathy:	-0,12075

Domain architecture

ATE86504.1

1 371 aa

LEC 22–57 · STR 58–126 · LEC 127–192 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

PS52031
LEC

PS52031

IPR039477
STR

IPR039477

ATE86504.1

1371 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0912
STR

DC_0912

ATE86504.1

1371 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
PS52031	LEC	DC_0243	22	192	InterPro cluster	GG-type lectin domain profile.	Central	High	Text match	588 proteins / 589 hits
IPR039477	STR	DC_0384	58	126	InterPro cluster	ILEI/PANDER domain	Central	Low	Positional only	49 proteins / 49 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

ATE86504.1

1 371 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	154	154	0,5565
Central domain	155	360	207	0,4172
C-terminal	361	371	10	0,1463

Note: Constraints were applied during segmentation.
Fixed 8 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Shigella phage Sf23 [NCBI] · taxon 2024321

Uroviricota Caudoviricetes Pantevenvirales Tevenvirinae Tequatrovirus

Host No host information

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)