Phage RBP Database

Genbank accession

XRX06363.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Seq2Symm

C1 confidence 0,839

C1	0,839
C2	0,545
C3	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MIKQTTAAVLLALTLAACGGGDDSPAASGPAIKLTYSGAPLVSPTNKARMMAAADIAASSPVTPDSQDTITRLQDAFKARGADIGVYPGIINGSKLHDIVMSENNGVGPTNAEIDAANVNISTWTLVNFQFDDMRGYIDTPEKAAMVAQFRRDIQVYRDREYLKGNVVFVPLALGSCIPSRADSQTAMQTFNNIARDVGAFNFEYMAVPPAVDPAHMGADCETPDSIAQQAYFDHVVDFLMSHYKVALDTIDKCKHNPEAIPEDGRAAQCWGIEPVKK

Physico‐chemical properties

protein length:	278 AA
molecular weight:	29828,43880 Da
isoelectric point:	4,89795
aromaticity:	0,07194
hydropathy:	-0,12698

Domain architecture

XRX06363.1

1 278 aa

STR 1–18 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

PS51257
STR

PS51257

XRX06363.1

1278 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1799
STR

DC_1799

XRX06363.1

1278 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
PS51257	STR	DC_0072	1	18	InterPro cluster	Prokaryotic membrane lipoprotein lipid attachment site profile.	N-terminal	Low	Positional only	130 proteins / 133 hits

Proteins with similar domain architecture

Phage

Burkholderia phage vB_FUB47a [NCBI] · taxon 3412847

Viruses

Host

Burkholderia sp. [NCBI] · taxon 36773

cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Genbank protein accession

XRX06363.1 [NCBI]

Genbank nucleotide accession

PV072775.1 [NCBI]

CDS location

range 22776 -> 23612
strand -

CDS

ATGATCAAACAAACTACGGCCGCTGTTTTGCTCGCATTGACTCTTGCCGCTTGCGGGGGCGGCGATGATTCCCCGGCTGCATCTGGGCCTGCAATCAAGCTTACGTACTCCGGCGCGCCTCTCGTATCACCTACCAATAAGGCCCGCATGATGGCTGCGGCGGATATTGCGGCATCGTCCCCGGTTACGCCGGATTCGCAAGACACGATCACCCGCTTGCAGGACGCATTCAAGGCCCGTGGTGCAGACATCGGCGTGTATCCCGGCATCATCAACGGATCGAAGCTACACGACATCGTTATGAGCGAGAACAATGGAGTAGGCCCTACGAATGCGGAGATTGACGCGGCTAACGTCAACATTTCGACGTGGACGTTGGTGAACTTCCAGTTTGACGACATGCGCGGGTACATCGATACGCCTGAAAAGGCCGCGATGGTAGCGCAGTTCCGGAGAGATATTCAGGTATACCGGGACCGGGAGTACCTGAAAGGGAACGTCGTGTTCGTCCCGCTCGCGTTGGGATCGTGCATCCCCAGCCGCGCGGATTCACAGACTGCCATGCAAACCTTTAACAACATCGCAAGGGATGTCGGGGCGTTCAACTTCGAATACATGGCTGTACCGCCCGCAGTTGACCCGGCGCATATGGGAGCGGACTGCGAGACTCCCGATAGCATCGCGCAGCAAGCATATTTCGACCACGTTGTAGACTTTCTGATGTCACACTACAAAGTTGCCCTCGATACCATCGACAAGTGCAAGCACAATCCGGAGGCTATACCCGAGGACGGCCGGGCGGCGCAGTGCTGGGGCATCGAGCCGGTGAAGAAATAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)