Protein

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Genbank accession
AUR96404.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTTLLAIGQINIGILPNIKGIDGVDPRLESYFVENGYDSAYARKNMCLGKTNNNVSDGTLISDNVFQNTEWDATSGALWIHWSQDWQYNIAAKRPFSIKDSDGKTIYSFCKWVSGSTGYCTFYSYNDAGEAVTVEYSEYNAREGVCDVDISFNPITNKVSLYVNGALRFEGDLDCNRRSAGTKAHSLRWYATWIGEGFVISQLIVANERTLGWKLKTLHPTAQGTHAEWVNDVANINGAIMNYTTSVDSDVAAKQSYVHSQVQSAIQEEMVIETLYVTLLADAIGAVTKVGALARVGGTDYNLPSTEMLDDKYITPYAEEMSVNPATGNPWTFAELNATEFGFRSE
Physico‐chemical
properties
protein length:346 AA
molecular weight: 38240,12320 Da
isoelectric point:4,71669
aromaticity:0,11272
hydropathy:-0,24855

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR96404.1
1 346
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,6130
Central domain 28 226 200 0,2605
C-terminal 227 346 119 0,9863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-226
C-terminal
227-346

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.224.A._10N.261.48.B1
[NCBI] 		1881226 No lineage information
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96404.1 [NCBI]
Genbank nucleotide accession
MG592591 [NCBI]
CDS location
range 21611 -> 22651
strand +
CDS
ATGACAACGTTACTTGCCATAGGGCAGATAAATATAGGCATTTTGCCTAACATCAAAGGAATTGATGGAGTAGACCCACGACTAGAATCATACTTCGTGGAAAATGGCTATGACTCCGCTTATGCCCGCAAGAACATGTGTTTAGGTAAAACCAATAATAATGTTTCTGATGGTACCCTCATCTCAGATAACGTATTCCAAAATACAGAATGGGATGCAACTTCTGGAGCACTCTGGATACATTGGTCACAAGATTGGCAGTACAATATCGCAGCTAAACGCCCTTTCAGTATTAAGGATAGTGACGGGAAGACAATATACTCTTTTTGTAAATGGGTATCAGGAAGCACTGGCTATTGTACTTTTTACTCATACAATGACGCAGGTGAAGCTGTCACAGTCGAATACTCTGAATACAATGCACGAGAAGGTGTCTGCGATGTTGATATCTCATTCAACCCTATTACCAATAAAGTCTCCCTTTACGTTAACGGTGCATTAAGGTTTGAAGGTGACTTGGACTGTAATAGACGTTCAGCAGGCACAAAGGCTCATTCCCTGAGGTGGTACGCCACATGGATAGGTGAGGGTTTCGTTATCTCTCAACTTATTGTTGCCAATGAGAGAACCCTAGGGTGGAAACTGAAGACACTACACCCTACTGCTCAAGGTACTCACGCAGAGTGGGTGAATGACGTAGCCAATATCAATGGGGCTATTATGAATTACACCACTTCCGTAGACTCAGATGTAGCAGCAAAGCAGTCGTATGTGCACTCTCAGGTTCAATCAGCTATTCAAGAGGAAATGGTAATAGAAACGCTTTACGTTACCTTGCTTGCTGATGCCATAGGTGCAGTAACTAAGGTAGGTGCCTTAGCAAGAGTAGGAGGCACAGATTACAACTTACCTTCTACAGAGATGTTGGATGACAAATACATCACCCCTTATGCAGAAGAGATGTCGGTTAATCCTGCCACGGGAAATCCGTGGACATTTGCAGAACTTAACGCAACAGAATTTGGGTTCAGGAGCGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6fc9582d94f353f0e3876154ffb1ec4bad3c9a3a072433b1faa7c13d59fd71fe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank