Protein

View in Explore
Genbank accession
BFW51899.1 [GenBank]
Protein name
Fiber protein, tail spike-like protein Glycoside hydrolase family 55 protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,99
Protein sequence
MAWSRPEIISGVTRGTKEFFDKILDGVGVALSDVETVSLEQSAVGGSFVIAAPHAFPGLDPTGATDSSAAFQAAINATPDGARLIVPAGVYKLDSGVAITDRTLTIESYGVTYTKATDGAIFSSAATVDTVYPVTALAAVTVNDENTAPGQRLTVSGNSGWSRGDIVQLVSDDVLPGGLPGGGTNEYRCGQHFMVHAASAGTVDLLGTLYDPMSTNIRVHRMRRHRVVFRGGRFTKTGGGVTVAFTRLVAPEFADAVVHTTGGQAVSFAGCVGWRADNVVVENAPNIPTSGIFGYGIMNMSSSWGRASRLRIHRVRHAYTNDNTALPAGSTQFHLYGRPFANVVSDSVAIGTDNSAWDTHSGSQAEQFVNCDAIDCYNVYGLRGRGHSVQGGKAVDCQHLLNIFSQTGSNSDSWGHIVDGVHATRITSGNHAIRVDLNPISGVLETRKSMIRNVTIDGAAAHTFVVNNGTLEVDGIMVTAAPTQISNAAVFQLDNANVTGTNVSMDHLQNTAGTGIRFVYVKGATQFTLRRGRWDFTSGNSRMTRIVVRAAGATDTVKISDLSMLNKTTAPYDTITSASFVDWSAGFELSSVVMASQASIEDAAKLATIANTRAEVVKLQLYSNTSPYTLAALPAGMFRGQMLVMFTLANTNQTITIPNDAAKKILTASGSSIALTGTSLPISFVWNGTNWMQTANV
Physico‐chemical
properties
protein length:697 AA
molecular weight: 73624,80860 Da
isoelectric point:6,62688
aromaticity:0,07461
hydropathy:0,01133

Domains

View on InterPro
Domain architecture
BFW51899.1
1 697 aa
STR 58–574 · ENZ 610–692 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
BFW51899.1
1 697 aa
Domain Start End Length (AA) Confidence
N-terminal 1 63 63 0,9614
Central domain 64 594 532 0,9897
C-terminal 595 697 102 0,9882
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Rhodococcus phage ReT1v-2 [NCBI] · taxon 3384246
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Prescottella equi [NCBI] · taxon 43767
cellular organisms Bacteria Bacillati Actinomycetota Actinomycetes Mycobacteriales

Coding sequence (CDS)

Genbank protein accession
BFW51899.1 [NCBI]
Genbank nucleotide accession
LC859274.1 [NCBI]
CDS location
range 8375 -> 10468
strand +
CDS
GTGGCGTGGTCGCGTCCTGAGATCATTAGCGGGGTCACCCGCGGTACCAAAGAGTTTTTCGACAAGATTTTGGATGGCGTCGGTGTGGCGTTGTCTGATGTTGAGACAGTGAGTCTCGAACAATCGGCAGTCGGCGGCAGTTTCGTCATCGCAGCACCACATGCGTTCCCGGGGCTGGACCCCACTGGCGCCACTGATTCGTCGGCAGCATTCCAAGCGGCGATCAATGCGACGCCGGACGGTGCACGCTTGATCGTTCCTGCTGGCGTGTACAAGCTCGATTCTGGCGTGGCGATCACGGACCGCACGCTGACGATCGAGTCCTACGGCGTGACCTACACCAAGGCCACTGATGGGGCGATCTTCTCGTCCGCCGCAACGGTCGACACCGTGTATCCAGTCACGGCCCTCGCCGCGGTGACCGTGAACGACGAGAACACCGCGCCCGGTCAGCGATTGACCGTTTCAGGCAACAGCGGATGGTCGCGTGGCGACATCGTCCAACTCGTCTCCGACGACGTCCTACCTGGCGGCCTACCCGGCGGCGGAACCAACGAGTATCGGTGCGGCCAGCACTTCATGGTCCACGCGGCATCCGCCGGCACCGTGGACCTTCTCGGCACCCTGTACGACCCGATGTCGACGAACATCCGTGTCCACCGGATGCGCCGGCACCGAGTCGTGTTCCGTGGTGGCCGGTTCACCAAGACCGGCGGAGGCGTCACCGTCGCCTTCACGCGTCTCGTCGCACCCGAGTTCGCCGACGCCGTCGTTCACACGACTGGCGGGCAAGCGGTCTCGTTCGCGGGCTGCGTCGGCTGGCGTGCAGACAACGTTGTCGTCGAGAATGCCCCGAACATCCCCACATCGGGCATCTTCGGCTACGGCATCATGAACATGTCCAGTTCCTGGGGCCGCGCCTCTCGGCTTCGGATCCATCGCGTGCGCCACGCGTACACGAACGACAACACCGCACTGCCCGCGGGTTCGACGCAGTTCCACCTGTACGGGCGCCCGTTCGCGAACGTCGTCAGTGACTCTGTCGCGATCGGCACCGACAACAGCGCGTGGGACACCCACTCTGGTAGCCAGGCAGAGCAGTTCGTCAACTGCGACGCGATCGACTGCTACAACGTCTACGGGCTCCGCGGCCGCGGACACAGCGTCCAGGGCGGCAAGGCGGTTGACTGCCAGCACCTGCTGAACATCTTCTCCCAGACCGGCTCGAACTCCGACTCGTGGGGACACATCGTCGACGGCGTGCACGCCACGCGGATCACCAGCGGAAACCACGCGATCCGCGTCGACCTCAACCCCATCAGCGGCGTGCTCGAAACCCGAAAGTCGATGATCCGCAACGTCACCATCGACGGGGCCGCAGCGCACACGTTCGTCGTCAACAACGGCACCCTCGAGGTCGACGGAATCATGGTCACCGCCGCCCCTACGCAGATCTCGAACGCCGCGGTGTTCCAGCTCGACAACGCGAACGTCACCGGCACGAACGTGTCGATGGACCACCTGCAGAACACCGCAGGAACCGGCATCCGGTTCGTGTACGTCAAGGGCGCAACACAGTTCACGCTGCGGCGTGGACGGTGGGACTTCACAAGCGGCAACTCCCGCATGACACGCATCGTGGTCCGCGCCGCCGGCGCCACTGACACGGTGAAGATCAGCGACCTGTCGATGCTGAACAAGACCACAGCCCCGTACGACACGATCACATCGGCGTCGTTCGTGGACTGGTCGGCCGGGTTCGAACTGTCCTCGGTCGTCATGGCATCTCAGGCGTCGATCGAGGACGCAGCGAAACTGGCCACGATCGCGAACACTCGCGCCGAGGTCGTGAAGCTGCAGCTGTACTCGAACACCAGCCCGTACACGCTGGCCGCCCTGCCCGCTGGCATGTTCCGTGGGCAGATGCTGGTGATGTTCACGCTGGCGAACACAAACCAGACGATCACGATCCCGAACGACGCGGCGAAGAAGATTCTGACCGCCTCTGGTTCGAGCATCGCGTTGACCGGCACCAGTTTGCCGATCTCGTTCGTGTGGAACGGCACCAATTGGATGCAGACGGCCAACGTGTAG

Genome Context

Tertiary structure

BFW51899.1
ColabFold structure
Source ColabFold
pLDDT 88.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhodococcus bacteriophage ReT1v-2 Suzuki,Y., Kubota,H., Ishitsuka,T., Takai,S. and Kakuda,T. 2015-04-30 — GenBank