Protein

View in Explore
Genbank accession
BFW51899.1 [GenBank]
Protein name
Fiber protein, tail spike-like protein Glycoside hydrolase family 55 protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,002
C2 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAWSRPEIISGVTRGTKEFFDKILDGVGVALSDVETVSLEQSAVGGSFVIAAPHAFPGLDPTGATDSSAAFQAAINATPDGARLIVPAGVYKLDSGVAITDRTLTIESYGVTYTKATDGAIFSSAATVDTVYPVTALAAVTVNDENTAPGQRLTVSGNSGWSRGDIVQLVSDDVLPGGLPGGGTNEYRCGQHFMVHAASAGTVDLLGTLYDPMSTNIRVHRMRRHRVVFRGGRFTKTGGGVTVAFTRLVAPEFADAVVHTTGGQAVSFAGCVGWRADNVVVENAPNIPTSGIFGYGIMNMSSSWGRASRLRIHRVRHAYTNDNTALPAGSTQFHLYGRPFANVVSDSVAIGTDNSAWDTHSGSQAEQFVNCDAIDCYNVYGLRGRGHSVQGGKAVDCQHLLNIFSQTGSNSDSWGHIVDGVHATRITSGNHAIRVDLNPISGVLETRKSMIRNVTIDGAAAHTFVVNNGTLEVDGIMVTAAPTQISNAAVFQLDNANVTGTNVSMDHLQNTAGTGIRFVYVKGATQFTLRRGRWDFTSGNSRMTRIVVRAAGATDTVKISDLSMLNKTTAPYDTITSASFVDWSAGFELSSVVMASQASIEDAAKLATIANTRAEVVKLQLYSNTSPYTLAALPAGMFRGQMLVMFTLANTNQTITIPNDAAKKILTASGSSIALTGTSLPISFVWNGTNWMQTANV
Physico‐chemical
properties
protein length:697 AA
molecular weight: 73624,80860 Da
isoelectric point:6,62688
aromaticity:0,07461
hydropathy:0,01133

Domains

View on InterPro
Domain architecture
BFW51899.1
1 697 aa
STR 58–574 · ENZ 610–692 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
BFW51899.1
1 697 aa
Domain Start End Length (AA) Confidence
N-terminal 1 63 63 0,9614
Central domain 64 594 532 0,9897
C-terminal 595 697 102 0,9882
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Rhodococcus phage ReT1v-2 [NCBI] · taxon 3384246
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Prescottella equi [NCBI] · taxon 43767
cellular organisms Bacteria Bacillati Actinomycetota Actinomycetes Mycobacteriales

Coding sequence (CDS)

Genbank protein accession
BFW51899.1 [NCBI]
Genbank nucleotide accession
LC859274.1 [NCBI]
CDS location
range 8375 -> 10468
strand +
CDS
GTGGCGTGGTCGCGTCCTGAGATCATTAGCGGGGTCACCCGCGGTACCAAAGAGTTTTTCGACAAGATTTTGGATGGCGTCGGTGTGGCGTTGTCTGATGTTGAGACAGTGAGTCTCGAACAATCGGCAGTCGGCGGCAGTTTCGTCATCGCAGCACCACATGCGTTCCCGGGGCTGGACCCCACTGGCGCCACTGATTCGTCGGCAGCATTCCAAGCGGCGATCAATGCGACGCCGGACGGTGCACGCTTGATCGTTCCTGCTGGCGTGTACAAGCTCGATTCTGGCGTGGCGATCACGGACCGCACGCTGACGATCGAGTCCTACGGCGTGACCTACACCAAGGCCACTGATGGGGCGATCTTCTCGTCCGCCGCAACGGTCGACACCGTGTATCCAGTCACGGCCCTCGCCGCGGTGACCGTGAACGACGAGAACACCGCGCCCGGTCAGCGATTGACCGTTTCAGGCAACAGCGGATGGTCGCGTGGCGACATCGTCCAACTCGTCTCCGACGACGTCCTACCTGGCGGCCTACCCGGCGGCGGAACCAACGAGTATCGGTGCGGCCAGCACTTCATGGTCCACGCGGCATCCGCCGGCACCGTGGACCTTCTCGGCACCCTGTACGACCCGATGTCGACGAACATCCGTGTCCACCGGATGCGCCGGCACCGAGTCGTGTTCCGTGGTGGCCGGTTCACCAAGACCGGCGGAGGCGTCACCGTCGCCTTCACGCGTCTCGTCGCACCCGAGTTCGCCGACGCCGTCGTTCACACGACTGGCGGGCAAGCGGTCTCGTTCGCGGGCTGCGTCGGCTGGCGTGCAGACAACGTTGTCGTCGAGAATGCCCCGAACATCCCCACATCGGGCATCTTCGGCTACGGCATCATGAACATGTCCAGTTCCTGGGGCCGCGCCTCTCGGCTTCGGATCCATCGCGTGCGCCACGCGTACACGAACGACAACACCGCACTGCCCGCGGGTTCGACGCAGTTCCACCTGTACGGGCGCCCGTTCGCGAACGTCGTCAGTGACTCTGTCGCGATCGGCACCGACAACAGCGCGTGGGACACCCACTCTGGTAGCCAGGCAGAGCAGTTCGTCAACTGCGACGCGATCGACTGCTACAACGTCTACGGGCTCCGCGGCCGCGGACACAGCGTCCAGGGCGGCAAGGCGGTTGACTGCCAGCACCTGCTGAACATCTTCTCCCAGACCGGCTCGAACTCCGACTCGTGGGGACACATCGTCGACGGCGTGCACGCCACGCGGATCACCAGCGGAAACCACGCGATCCGCGTCGACCTCAACCCCATCAGCGGCGTGCTCGAAACCCGAAAGTCGATGATCCGCAACGTCACCATCGACGGGGCCGCAGCGCACACGTTCGTCGTCAACAACGGCACCCTCGAGGTCGACGGAATCATGGTCACCGCCGCCCCTACGCAGATCTCGAACGCCGCGGTGTTCCAGCTCGACAACGCGAACGTCACCGGCACGAACGTGTCGATGGACCACCTGCAGAACACCGCAGGAACCGGCATCCGGTTCGTGTACGTCAAGGGCGCAACACAGTTCACGCTGCGGCGTGGACGGTGGGACTTCACAAGCGGCAACTCCCGCATGACACGCATCGTGGTCCGCGCCGCCGGCGCCACTGACACGGTGAAGATCAGCGACCTGTCGATGCTGAACAAGACCACAGCCCCGTACGACACGATCACATCGGCGTCGTTCGTGGACTGGTCGGCCGGGTTCGAACTGTCCTCGGTCGTCATGGCATCTCAGGCGTCGATCGAGGACGCAGCGAAACTGGCCACGATCGCGAACACTCGCGCCGAGGTCGTGAAGCTGCAGCTGTACTCGAACACCAGCCCGTACACGCTGGCCGCCCTGCCCGCTGGCATGTTCCGTGGGCAGATGCTGGTGATGTTCACGCTGGCGAACACAAACCAGACGATCACGATCCCGAACGACGCGGCGAAGAAGATTCTGACCGCCTCTGGTTCGAGCATCGCGTTGACCGGCACCAGTTTGCCGATCTCGTTCGTGTGGAACGGCACCAATTGGATGCAGACGGCCAACGTGTAG

Genome Context

Tertiary structure

BFW51899.1
ColabFold structure
Source ColabFold
pLDDT 88.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhodococcus bacteriophage ReT1v-2 Suzuki,Y., Kubota,H., Ishitsuka,T., Takai,S. and Kakuda,T. 2015-04-30 — GenBank