Protein

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Genbank accession
YP_009851271.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSSTNQIGYAYAGTKAMMPYLGSGYIAGEAPPPLVPEHPDGRTYVNYELKPLTVKVLHADSFTPMAEVRSLADGTWRIDGLNPSMRYQVIFQNDNYRDSSDVLYNSAIQDWIGAVPVAYTPPDDALRLATPLAMERWAMPTSIQAYSVNGGLLTVPTFSGTFSGVTVEANKSNVTVNLRPVQAVGTYTLQVSAVKDSQTINSNVCSFRIRPQQVDTQQFIRFALLGTTPGPASVTSTWARCVIGNGGLTGGTFVADADALSPDYPVSLNSDWSTDIISGNMYNDGAGNWVSLNNGYNNGFIVEGWFSVSSWPTTDTAMLTSIKTSLAASSLFGLTLRPDKRIGTIMKYGSTNSARFENVGEVQYTLPTNEWFHILVHVLPSQQLGYLYVNGQYTDRWPMIKNNTVPTNTNMNVGYVTFMCNNDQGCTGTAVAKCNRVVWLESRFSNPNFTPSKTKYHEWQATVQCATYGVNGNAVNEMSSCEGTWSTTGNVSSRPVFDPVEGVVFPNTTATDGYAYMNFQRGYGGVRGSLCLDVWFKPLTAYNGDKNIIQVGNPSSSDGRVHIALNNGKLKAYGCPYTTSTAVTLNGTTVLNNNQWYLATLCCDVIQREWRLYLDGALEASISDPNLAPLATPAVSSMTNIILGGRHPLSSASGTIPSFHGIIGATRLTINGPRYYSNFTPVGIGAWDALPARPAA
Physico‐chemical
properties
protein length:696 AA
molecular weight: 75463,90800 Da
isoelectric point:6,09487
aromaticity:0,10345
hydropathy:-0,16624

Domains

Domains [InterPro]
DC_0739
ATT
1–245
DC_0739 G3DSA:2.60.120.200 IPR013320
IPR013320
STR
284–416
IPR013320 PF13385
G3DSA:2.60.120.200
STR
527–668
G3DSA:2.60.120.200
YP_009851271.1
1 696
Architecture
ATT
STR
STR
ATT 1-245 | STR 248-430 | STR 466-668 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009851271.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,9001
Central domain 16 281 267 0,3910
C-terminal 282 696 414 0,7370
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-281
C-terminal
282-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Mendera
[NCBI] 		2650877 Uroviricota > Caudoviricetes > Menderavirus >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009851271.1 [NCBI]
Genbank nucleotide accession
NC_048804 [NCBI]
CDS location
range 125289 -> 127379
strand +
CDS
GTGAGTAGCACAAATCAAATCGGATATGCTTATGCTGGCACGAAAGCCATGATGCCCTATCTTGGCTCTGGATACATTGCGGGTGAGGCTCCGCCTCCTTTGGTACCAGAACATCCAGACGGCAGAACCTACGTCAACTATGAGCTAAAGCCTCTGACTGTCAAGGTCTTGCATGCCGACTCATTTACGCCTATGGCTGAGGTAAGATCGCTAGCGGATGGAACCTGGCGCATTGACGGATTGAACCCATCTATGCGGTATCAAGTCATCTTCCAGAACGACAACTACAGAGATAGCAGTGATGTTCTGTACAATTCGGCAATCCAAGATTGGATCGGAGCCGTTCCAGTCGCATACACGCCGCCAGATGATGCCCTGCGACTGGCTACACCTTTGGCTATGGAGAGATGGGCTATGCCAACAAGCATCCAGGCATACTCCGTCAATGGTGGATTGTTGACCGTGCCGACTTTCTCTGGAACCTTTTCTGGTGTGACTGTAGAAGCCAACAAGTCCAATGTGACAGTGAATCTACGTCCCGTTCAAGCTGTGGGAACATACACTTTGCAGGTGTCGGCTGTCAAAGATAGCCAGACCATCAATAGCAATGTGTGCTCGTTTAGGATCAGGCCTCAGCAGGTGGACACGCAACAGTTCATCCGCTTCGCTTTGCTCGGAACGACACCCGGACCAGCTAGCGTCACATCCACCTGGGCTAGATGTGTCATCGGTAATGGAGGCTTGACAGGAGGAACATTTGTCGCAGACGCAGATGCCTTGTCTCCAGACTATCCGGTCTCTTTGAATAGTGATTGGTCCACGGATATCATCAGCGGTAACATGTACAATGATGGTGCCGGTAACTGGGTCTCGCTGAACAACGGATACAACAATGGCTTCATTGTCGAAGGATGGTTCAGCGTCTCTTCATGGCCAACTACCGATACAGCCATGCTTACCTCCATCAAGACCTCGCTTGCGGCGTCGTCGCTGTTTGGGCTGACGCTTCGCCCAGATAAGCGCATCGGGACAATCATGAAGTATGGTTCAACAAACTCCGCGCGGTTCGAGAATGTGGGTGAGGTGCAGTATACGCTACCAACCAACGAGTGGTTCCATATCCTTGTGCATGTGCTGCCTAGCCAGCAGCTAGGCTATCTGTATGTCAATGGGCAATACACAGATAGATGGCCCATGATCAAGAACAACACCGTTCCGACTAACACCAACATGAATGTTGGCTATGTCACATTTATGTGCAACAATGATCAGGGCTGCACTGGTACAGCCGTTGCCAAATGCAACCGTGTGGTGTGGTTGGAAAGCCGCTTCTCCAACCCTAACTTCACTCCATCCAAGACCAAGTACCATGAGTGGCAAGCTACTGTCCAGTGCGCCACCTATGGAGTCAATGGCAATGCGGTAAACGAGATGAGTTCTTGCGAAGGAACATGGTCAACAACAGGCAATGTATCATCTCGTCCTGTGTTTGATCCAGTCGAGGGTGTGGTGTTCCCAAACACCACAGCCACTGATGGATACGCTTACATGAACTTTCAGAGAGGATATGGGGGCGTTCGTGGCTCTCTGTGTCTGGATGTGTGGTTCAAGCCACTCACTGCATACAATGGCGACAAAAACATCATCCAGGTGGGTAATCCTAGTTCATCTGATGGACGTGTGCATATCGCATTGAACAATGGCAAGCTGAAAGCGTATGGATGCCCCTATACGACATCAACAGCTGTCACCTTGAATGGAACGACAGTACTGAACAACAACCAGTGGTATCTGGCCACCTTGTGTTGCGATGTTATCCAGCGCGAGTGGAGACTCTATCTAGATGGCGCGCTTGAGGCTAGTATCTCAGATCCCAATCTAGCACCTCTGGCGACTCCAGCTGTCTCATCTATGACCAATATCATCTTGGGTGGTCGTCATCCATTGAGTAGCGCTAGTGGCACGATCCCATCATTCCATGGCATCATCGGCGCAACACGATTGACTATCAATGGCCCTCGCTACTACTCCAACTTTACACCTGTTGGCATCGGCGCATGGGATGCACTGCCAGCTCGCCCAGCGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2974e6c70efe9806fa736aeb777f4255d93cd77f5c6fc16e531565fca5b69540
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5820
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50