Phage RBP Database

Genbank accession

XMN01142.1 [GenBank]

Protein name

tail protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 1,00

Protein sequence

MLIQQGFSGLSRALRRPIGKDYFDAENRRISNVSDPVLSQDAVTRKWSEEYFSDLISDIQGPVNNAQNVLYVDGDGISTTVQKGIIKQFTSVSDVRGKAGDKDGDQAVLLGYYQDSPGVGGGNLYWDSLSVEPDNGGSVFAVTGVPNGRWKRDITHGVWAEWFGARNDGSDAAGTTAAVWAAIIALRHDPETIVQYIGGPTVTAYASGRLNFGSGVFALQPDSFDITQDLGLTIVGQGFRGKNQAMKAATTLLCKGVSSGFFFRHYGNGARNLTFKDMDVVYENSDFTGDIVESLTSPGLTLERTRLGCYGGLLGTRVQTARSCIRPTFDEFLRCEDVVFDGAQNGFWSDGARTIPGLSFGGWGTTLINCTFYDLANSMIHHAANRGRSIVNVIGCAFNPINISPARCFDITNIEGINVTGNQFTPSTGSQPTQEWIRLLGSTGAIDGNTFSGPSSKLGTIGGVDPSSIRFSNNRVSCQGGLVVSGGIFTGSGNEYSIADHGVDVSPVAITTLDIGPDIFKSGVSGNSYRISADSSLLGGRINYIFEQDNSNSKFSNVSSRVSIDNVDRRISTIGSLPSTASPYFSGRTYNVTVAGTFTLPTPIPGIRLRVMKSTATALTVSTTSGSNILVGASSARTSAVATAAEIGPAIEFVAFSSASWVAQVLSGSWSFS

Physico‐chemical properties

protein length:	673 AA
molecular weight:	71382,62850 Da
isoelectric point:	5,53631
aromaticity:	0,09361
hydropathy:	-0,08752

Domain architecture

XMN01142.1

1 673 aa

RBD 88–154 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059934
RBD

IPR059934

XMN01142.1

1673 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0717
ATT

DC_0717

DC_0743
STR

DC_0743

XMN01142.1

1673 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059934	RBD	DC_0541	88	154	InterPro cluster	Phage tail protein-like, small four-stranded beta-sheet domain	C-terminal	Low	Positional only	683 proteins / 690 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XMN01142.1

1 673 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	175	175	0,9929
Central domain	176	547	373	0,9905
C-terminal	548	673	125	0,9040

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pseudomonas phage Flu_PA14_3 [NCBI] · taxon 3390415

Viruses

Host

Pseudomonas aeruginosa PA14 [NCBI] · taxon 652611

Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas

Genbank protein accession

XMN01142.1 [NCBI]

Genbank nucleotide accession

PQ287281 [NCBI]

CDS location

range 16660 -> 18681
strand +

CDS

ATGCTGATTCAGCAGGGATTTTCAGGTCTTTCAAGGGCCTTGAGGCGCCCAATAGGTAAAGACTACTTTGACGCCGAAAATCGAAGAATCTCTAATGTCTCCGATCCTGTGCTTTCGCAGGATGCAGTAACCAGAAAGTGGTCCGAGGAATACTTTTCTGATTTGATCAGTGATATTCAGGGTCCGGTAAACAATGCACAGAATGTGCTTTATGTAGATGGTGACGGAATATCAACTACTGTTCAGAAGGGGATTATAAAACAATTCACTTCTGTCTCTGATGTAAGAGGGAAAGCAGGGGACAAGGATGGAGATCAAGCTGTCCTTCTAGGGTACTATCAAGACTCGCCTGGAGTTGGGGGCGGGAATCTGTACTGGGACTCTCTCTCTGTAGAGCCAGATAATGGCGGATCGGTCTTTGCTGTTACCGGGGTTCCAAATGGTCGCTGGAAGCGCGATATAACGCACGGCGTGTGGGCCGAATGGTTCGGCGCTCGCAATGATGGTTCTGATGCTGCGGGAACTACTGCTGCGGTGTGGGCTGCAATCATCGCACTCCGGCACGACCCGGAGACGATCGTGCAGTACATCGGCGGTCCCACTGTCACAGCGTATGCATCCGGGCGACTGAACTTCGGCAGCGGGGTCTTTGCACTCCAGCCTGATAGTTTCGATATTACCCAGGACCTCGGCCTGACCATCGTCGGGCAGGGATTCAGAGGTAAGAACCAGGCGATGAAGGCGGCTACCACGTTGCTCTGCAAGGGAGTTTCAAGTGGATTTTTCTTCCGCCACTACGGGAATGGCGCCCGTAATTTGACATTCAAAGATATGGATGTCGTATATGAGAACTCGGATTTCACTGGAGATATAGTTGAGAGCCTGACATCTCCCGGCTTGACGCTTGAGAGGACTAGGCTTGGCTGCTATGGAGGCCTTCTTGGAACTCGCGTTCAAACCGCGAGAAGCTGTATCCGACCAACTTTCGACGAATTTTTGCGTTGCGAAGACGTTGTGTTTGATGGCGCTCAGAATGGCTTTTGGTCAGATGGTGCGCGGACAATTCCAGGTCTGTCTTTTGGTGGCTGGGGTACGACCCTTATAAACTGTACGTTCTATGATCTTGCCAATTCCATGATACATCACGCGGCTAATAGAGGTAGAAGTATTGTTAATGTAATTGGGTGTGCGTTCAATCCTATCAATATAAGTCCTGCTAGGTGTTTTGACATTACCAACATTGAGGGAATCAATGTGACCGGAAATCAATTTACACCAAGCACGGGAAGCCAGCCAACGCAAGAATGGATTAGGCTTCTAGGTAGCACTGGCGCTATAGATGGGAATACGTTTTCAGGCCCATCCTCAAAGCTCGGAACCATTGGAGGCGTAGATCCTTCGTCAATCAGGTTCTCTAACAATAGGGTATCCTGCCAAGGTGGTCTTGTAGTATCCGGAGGAATTTTTACAGGCTCTGGAAACGAATATTCTATAGCTGATCATGGAGTTGACGTATCGCCAGTGGCTATTACTACTCTTGATATTGGTCCTGATATTTTCAAGTCTGGAGTATCTGGGAACTCATATCGCATCTCTGCGGATAGCTCCCTTCTTGGCGGGAGAATTAACTACATATTTGAGCAGGATAACTCAAATAGTAAGTTTTCAAATGTTTCCTCAAGGGTCTCAATTGATAATGTTGATAGGAGAATATCTACTATAGGCTCTCTCCCATCTACCGCGTCTCCGTATTTTAGCGGAAGAACCTATAATGTTACCGTTGCGGGTACATTCACATTGCCCACTCCAATTCCGGGAATTAGATTGAGAGTAATGAAAAGCACAGCGACGGCACTGACAGTATCTACCACATCCGGCTCGAATATTCTTGTCGGTGCCAGTTCGGCAAGAACCTCTGCCGTTGCGACAGCCGCCGAGATTGGGCCAGCAATTGAGTTTGTTGCTTTTAGCTCTGCATCATGGGTGGCGCAAGTCCTGTCAGGGTCTTGGTCATTCAGCTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)