Protein

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Genbank accession
AMO43045.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MPVYNFSTTPLYVAEGQTVQFRYEAPDTFDTLEQIEIQIGELTVFWIIETTKEDFSPDPFDLQDINPAELDVVYSYAETEEGPDAAPFGGGSSFNPLRTGEEVITIGGLSDGTQAPITISSNVQNAADYAYRIRTNPVAQWGAWTTGDNKPAATQFVSNGDQIQVRLKASAAPADEKRVTVTIGTGEEAWRITTGAQPVNEPNPVPVFDPVNALELNTQVYSNIVQILGLNTDALIQIDKAGELRISSSNATTTEVIGTAEYQVLSSGTAWAASGTVTNGDYVQLRGTSSAASNADKIFSIDIGDGIGIAAWNTRTGDGVNTIPDNFIFQDLVEVVPGTTDIASTVSFGPTAPEDPNAALIQGLTDGISVPVVLRAAETTAINPRIKVNGGSSGTFSNVSVQNGDYIQLIVDADPDLSVAPTTESVQVAINVGDRVITAWSVTNWFGPDEIPAFVQPTNLQNQTPGGFAVLGPIGMTDFNTAITISTTSPVAYDNGGTATGEALGSEVLISINGDAAVAGPRTAQPDNTGNPVTVTFFIPQPGDADADPVEGLSHYSEFDISLGLAPTFTFRSFNYAVKPVPPSYQGVWYSNKNEFFDEAAYEAAGSPVVNASSYYRASKLDGYSTGTVLPVTKESINGYGDLEERFPGFLECDGTSYNAADYPFLFDVIGTQYGFDTAGGEGEYDETNKQYTGTFRVPDYRNRRLTGAGIVDGNRGSSAFLEADVGSYEIPGSTGGWWYVSDVDVAGPDPLEQVITTPGSNTGTESIFFELGTPKTFGTETLITEVPFNVTGQVNAIIGPVSEKTVQVPTHEHFVVTGIPEDISGDPVIPWDTRAYYGTQGSGQRGPSSQGPDEPAVSRVSSWWRGMDALNAGVFDQELGRTFGPPQKVDDYLPLGPEGASTTASFGNYWSSPIGPLENLSPRDSYFQVNSGSPTDAAVIDSKEALVRIDEYQNPNELYSHTHLLGTDVVGDPNLDFSYGNANSFGGLRAGLPNFSNSVEMIFNQSDVVIELNEAEFSWNNSTRPIPTVAMDPTRKVPILAPFHKIKYIIKAY
Physico‐chemical
properties
protein length:1054 AA
molecular weight: 112588,32510 Da
isoelectric point:4,12466
aromaticity:0,09867
hydropathy:-0,23700

Domains

Domains [InterPro]
DC_0346
STR
1–1038
DC_0346
IPR037053
ATT
620–702
IPR037053
IPR011083
ATT
648–679
IPR011083
SSF88874
STR
649–727
SSF88874
AMO43045.1
1 1054
Architecture
STR
ATT
STR
STR 1-619 | ATT 620-702 | STR 703-1038 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMO43045.1
1 1054
Domain Start End Length (AA) Confidence
N-terminal 1 674 674 0,8328
Central domain 675 895 222 0,7182
C-terminal 896 1054 158 0,3931
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-674
Central
675-895
C-terminal
896-1054

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM32
[NCBI] 		1278479 Uroviricota > Caudoviricetes > Pantevenvirales > Bristolvirus > Bristolvirus rhodeisland
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
d2bba535a5b64e11e895b6111c2550cda12bfb860481629e15870504655cef70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5137
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50