Protein

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Genbank accession
CAB5230727.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTDEYIVVETESTQSVLSTDISIIVIENTTVQTKLTTISDTATVVNNVIESVVNVEESIATVSQEYFTPVISSGAQGPQGPQGLQGSSGAASTVPGPQGVQGPTGPTGPIGPIGPQGDIGDTGVKGDAGTSLSNASDIDLSNLAPGAVLSYNSITGKWVATTAPQDLEQDGGFF
Physico‐chemical
properties
protein length:174 AA
molecular weight: 17553,99140 Da
isoelectric point:4,05003
aromaticity:0,04023
hydropathy:-0,04770

Domains

Domains [InterPro]
IPR008160
74–130
IPR008160
CAB5230727.1
1 174
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5230727.1 [NCBI]
Genbank nucleotide accession
LR798422 [NCBI]
CDS location
range 52862 -> 53386
strand +
CDS
ATGACAGATGAATATATAGTAGTTGAGACCGAAAGTACACAAAGTGTACTTAGTACAGATATTAGTATAATAGTAATTGAAAATACAACTGTACAAACTAAATTAACTACTATTAGTGATACAGCGACAGTAGTTAATAATGTTATAGAAAGTGTAGTAAATGTTGAGGAATCAATAGCTACAGTTTCACAAGAGTATTTTACTCCTGTAATATCAAGTGGTGCACAAGGACCACAGGGACCCCAAGGTTTACAAGGCAGTTCAGGTGCTGCGTCTACAGTTCCAGGGCCCCAAGGGGTTCAAGGACCAACAGGACCAACGGGACCAATCGGGCCAATAGGGCCGCAAGGCGATATCGGCGATACAGGTGTAAAAGGTGATGCAGGAACTAGTCTTAGTAATGCATCTGACATAGATTTATCTAATTTAGCTCCTGGAGCAGTACTCTCATATAATTCCATAACAGGAAAATGGGTAGCAACTACTGCACCACAGGATTTAGAACAAGATGGTGGATTCTTTTAA

Tertiary structure

PDB ID
df5364e20f4a50fcded18ce1669c1ca3d593ec66c9e7d6228443398a5b959544
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50