Protein

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Genbank accession
AXQ70377.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISVAVNGRVLDEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTGLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYVNNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVHEPYAFDDVDGQELYGPNELNTNPPPVVIETATTTTVTEMEYVNGQFLAKIPKNDDFDYFVDLTLPHDVTFGINVSFPTVGGVTVTRDITLSGRLISATETDDGGVPPESYWYTFIIANIDYSGNQLVSSLDGVTINNNYFTISDNQAIVSGPYFSPIEGDQLWVHLQHQTNDGNDFSVLIEWWKIDDDNVQIPGTYQSMSYYKDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSILQLEEIHSIVTRTNVSYPDDTVVKVVVRATENATGSRDRKYNALITRHTIGYDRDTGKVRYTIAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITDNGIVEGEPTKAKKFDMLYIRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNVFTTSEQLTADDNLYVVITSSDGSTSDRLPATVTGLHTFTCNLPTDFQLNIWDGASVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYVIPSS
Physico‐chemical
properties
protein length:829 AA
molecular weight: 92671,77420 Da
isoelectric point:4,53026
aromaticity:0,10253
hydropathy:-0,39747

Domains

Domains [InterPro]
DC_0118
STR
1–671
DC_0118 DC_0808
NF040662
Unmapped
357–823
NF040662
AXQ70377.1
1 829
Architecture
STR
RBD
STR 1-671 | RBD 687-828 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella virus VSt472
[NCBI] 		2301723 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXQ70377.1 [NCBI]
Genbank nucleotide accession
MH424446 [NCBI]
CDS location
range 29935 -> 32424
strand +
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCAGGCACGCCGAAAGAAACGGGGATTGTGCCAGCGGGGACAAACCTGTGGAAGTGGCTGAATAAATCAAACCTACCAGCCAGCATTTCAGTTGCGGTAAATGGCAGAGTGCTTGATGAAGATGATGAGCTTTCATTCTGTCTGCGCGATGGCGACGTGGTCAACGTTTATTGCCAGCCGTCCGGCGCAATCGGCGACCTAATCGGTGCGATACTGAAGCCAGTAACGAAGATTTTCTCTTTCCTTACCCCGAAGGTATCCACTCCAAAAACGGATACCAGCTCAAAAACATCTCCGAATACCGGTCTTAAAGCGCAGACGAACATTGCGCGAAATGGCGAGGCGCGTCCTGATAATTTCGGGCAGATTCGCGCGTTTCCTGATTTGCTTCAGGAATCATTGTTTGAATATGTAAACAATATTAAGTACGTGACCGAGTTCATGAATTTTGGCCTCGGTAAATATGATGTTTCCTCTGTGCGTTACTCTGAGTCAAACCTCGGCTCTCTGGCTGGCGCGAGTTACACCATTTATCAGCCAGGAGAGGTTATTCCGGTTGTGCATGAACCTTACGCATTTGATGATGTTGATGGGCAGGAGCTCTACGGGCCAAACGAACTTAACACCAACCCTCCGCCAGTGGTCATTGAAACTGCAACAACAACCACGGTAACGGAAATGGAATACGTCAATGGACAATTCCTTGCGAAGATACCAAAAAACGATGATTTTGATTATTTCGTTGATCTGACATTGCCGCATGATGTTACATTTGGCATTAACGTATCATTCCCTACAGTAGGTGGGGTTACTGTCACCAGAGATATAACATTGTCTGGAAGGTTGATATCAGCAACAGAAACTGACGACGGAGGTGTGCCGCCAGAAAGCTACTGGTACACATTTATAATTGCCAATATAGATTACTCTGGCAATCAACTTGTATCATCACTGGATGGAGTAACCATTAACAATAATTACTTTACTATTTCTGACAATCAAGCCATTGTTTCCGGTCCATATTTTTCGCCAATTGAAGGTGATCAGTTGTGGGTGCATCTTCAGCACCAGACCAATGACGGCAACGATTTCAGTGTGCTCATTGAGTGGTGGAAGATTGACGATGATAACGTTCAGATACCAGGTACATATCAGTCGATGAGCTATTACAAGGACGTAGACCGGAATGACACATTCTACTACACGATAAAATTAACCCCATCAGCTGGCACTGGTCGCTACGCGATTCAGATGCGACGGACAAACAACAGCTCCGACACATCAATCCTCCAGCTTGAGGAGATTCATTCAATCGTTACGCGCACCAACGTTTCGTACCCAGATGACACTGTGGTTAAGGTCGTCGTGCGAGCAACAGAGAACGCCACAGGGAGTCGTGACAGGAAATATAATGCACTTATTACGCGTCATACAATCGGTTACGACCGCGACACTGGCAAGGTGCGCTACACGATTGCACCATCCCGTAGCTTTGCTGATGCTGTTTTGCATAACTGGCTAATTACCGCTGGCAATCCAGAAAACACGATAGACATCGTGAAGTTGTATGAAATTGCCGATAGCCTGCCTGATGAGAGATTGGGTTATTTCGATTACACGTTTGATGATGAGGATAAGTCAATCGGCGAGCGCTTGCAGACCATCTGCGATGCGGCGCGTGTTACTGCATTCTGGGATGATGGAGTGATGAGCTTCTCGCGTGATGAAAAGAGAGAATATCCGGCAACTGTATTTAATACCAGAAACACGCAGAGTGACGGTTACAAGCTGAGTTATGATATCAGTCTTCCAGGCACTTATGATGGCGTTAACGTCGAATATCGCGACCCAACAACGAATAAGCAGGCCAACGTTTACTATCGCATTACAGATAATGGAATTGTCGAAGGCGAGCCAACAAAAGCAAAGAAATTCGACATGCTTTATATTCGCAATCGTTATCAGGCTGTTGACCGCGCAATTCTTGAGTGTCGTCGCCTGATTTACTCCCGTCGCAGCATGGAGATTAAGGCTCTGGCGGATGGCGAATGGGTCAACGTAGGCGACATGATTCAGGTTGTCGATATGTATGATGATGTGCAACAGACTGGCGTTATTGAAGCGCGCAACGGAAACGTATTCACAACAAGCGAGCAACTAACGGCTGATGATAATCTTTATGTTGTGATTACCAGTTCTGATGGCAGCACATCAGACAGATTACCAGCAACAGTGACCGGATTGCATACATTCACCTGCAACCTGCCGACTGATTTCCAGCTGAATATATGGGATGGAGCAAGCGTGCAATCTGAATCTCGCTATGTGCTGAGCACTGAAAAAGAACTGGATACCACTCTGTGGGTTGTCAGCCAGAAAAATCCAGGAAGTGACGGTACAACAACTCTGACCATGAGCGAATACAGTGATGACATGTACGAATATGTCATCCCGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
435a2b406edb9beea6f4d6f7059cfe8ada6450a81f4effe134905cd65cb73af7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8477
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella Typhimurium bacteriophage VSt472 Volozhantsev,N., Denisenko,E., Verevkin,V., Myakinina,V., Kislichkina,A. and Krasilnikova,V. 2017-09-14 — GenBank