Protein

View in Explore
Genbank accession
QBX25250.1 [GenBank]
Protein name
endopeptidase
RBP type
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MKPILFNKNEQQFDTYGLGEIDVTTGNVTRERNGLYTFYAEYPANGPLASVLEKEMKIKADAGLRTKNQTFEISRIVKDSSGVLKIYGSHIKHKLEYMAVRHGINLSGTASVALAIWANNLIGDYRFSTWSDIDTTGSTTFTADKMTNAHLALGGVEGSILDVWGGEYEFDNLTVRLHKQLGRRAPTVLEYGRNIISAESDESIEESYTSVYPFATYTPESQGSDSTPAPVTVTIPGDYVDSKYISMYANRRIKVVDFSSEFKEKEIPTPDKLRTMAVKFMEHNKIGAPKINTKIEYVDLASTLDYQDNKIIEELEFCDIVPVYYPSIGITEDDAKVTKIVYDFVNERNESVEFGIIGESIRSAMTGGLSGRMDSLENRQKAIESGLPDYLLNASGNKVWYQKPAEGTEHKVGDLWFEKNGQYDRMYVWNGEMWEKRIDTEDVDRVKKDIDEKLKQSTESIQQVENKASEALTKAGAIIDSQELLDKINAHLYSDTNNDDNGILGRKFRQQREANRSTRNIATSTRDKLTDYQRTNDENLVRIGQQLDNTVSKAEMKQTADGIRETIAKITVGARNLMVGTKDFSGDWFNKAKWTLEDEKYLGLSVYSRQEEWLGLSEIVEVRVGETYTFSAYVKSSIENDLVFMYLDNRLVEPRASLSLVRKDIQVSTNWTRVSATFSVTKAGLMTPRFERNNKNAKLYVAGYKLELGNVPSDWSQAIEDTNQIIDDKITTFDRTIDGIRATVAEAKSYIDADGQRRQELNQLIRDETAKGINTVLSTVEQSGYAKRTEIQSITETQRLYDRIIGTTEDGIKQNIARMTLTDSLFQTEVSKAVNKELTPSNYVANPFTMSDYVRKYNGNGSSATVTLSSTGINVFGKLELHAHSKLFYSDAIWLPLTRIPESVKDLSFSIIIDGIDKCKISVYLGTERSSTYINYQRQDNTIYGTLTGINSDYRGSDGVYLKLSFEGLNGQSVFLQKPIVVEGREPKFDFEINKRTELDQAVRSVQTQLAGSWSVKNINSAGDLISGINLGADGRNRITGKLTHITNETLMDRASIKSAAIESITADQITTGTLNASRINVINLNARSITSGTFRGLEYEGGIIRGNNGNTIINLNTNITTYNGTARIEFKSAHNNLVYSSSGTHAFLAPTQRQGTSYAAWAFGVGTSSSLDPNAGFVGLKIFNDPGSRKVILVGDVQIVKDTFTRDAPATALSDVLSQIQYNFVQIKNWFSRNDLGHPGLYDIEL
Physico‐chemical
properties
protein length:1247 AA
molecular weight: 139362,38670 Da
isoelectric point:5,50050
aromaticity:0,08741
hydropathy:-0,45662

Domains

View on InterPro
Domain architecture
QBX25250.1
1 1247 aa
STR 582–707 · RBD 1017–1188 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QBX25250.1
1 1247 aa
Domain Start End Length (AA) Confidence
N-terminal 1 585 585 0,9255
Central domain 586 1100 516 0,3966
C-terminal 1101 1247 146 0,4249
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Streptococcus phage Javan246 [NCBI] · taxon 2548068
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Streptococcus gordonii [NCBI] · taxon 1302
cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Coding sequence (CDS)

Genbank protein accession
QBX25250.1 [NCBI]
Genbank nucleotide accession
MK448884 [NCBI]
CDS location
range 30858 -> 34601
strand +
CDS
TTGAAGCCTATTTTATTTAATAAGAATGAGCAACAATTCGACACTTACGGGTTGGGAGAAATTGATGTAACAACAGGAAATGTCACCCGCGAGAGAAACGGTCTCTACACGTTTTATGCGGAATATCCAGCTAATGGCCCTCTAGCCTCTGTCTTAGAAAAAGAAATGAAAATTAAGGCAGACGCTGGACTTCGGACGAAGAATCAGACTTTTGAAATATCCAGAATTGTCAAAGACAGTAGCGGAGTTTTGAAAATCTATGGTAGTCACATCAAGCACAAGCTAGAGTACATGGCAGTGCGTCACGGGATCAACCTAAGCGGTACAGCTTCCGTGGCTCTTGCCATCTGGGCTAATAATCTGATAGGTGACTATCGCTTTTCTACTTGGTCAGACATTGACACAACAGGTAGCACAACATTTACCGCAGACAAGATGACGAACGCACATCTTGCTCTCGGTGGTGTTGAGGGCTCTATTTTGGATGTCTGGGGCGGTGAGTACGAGTTTGACAACCTGACTGTCAGATTGCACAAACAGCTTGGTAGAAGAGCTCCTACGGTCTTAGAATACGGTAGGAATATCATATCAGCTGAGAGTGATGAATCTATTGAAGAATCGTATACCTCAGTCTATCCGTTTGCTACCTATACACCAGAGAGCCAAGGAAGCGATAGCACACCAGCTCCCGTCACGGTAACGATACCAGGCGATTATGTAGACAGTAAGTACATCAGTATGTACGCCAATCGACGTATAAAAGTAGTGGATTTCTCCAGCGAGTTTAAGGAGAAGGAAATTCCAACCCCTGACAAGCTGAGAACTATGGCAGTGAAATTTATGGAGCACAACAAGATTGGCGCTCCTAAAATCAATACTAAAATTGAGTATGTGGACTTAGCAAGCACACTTGATTATCAAGACAATAAGATTATCGAAGAGCTGGAGTTCTGCGACATCGTGCCAGTCTACTATCCATCTATCGGAATCACAGAGGACGATGCGAAAGTCACTAAAATTGTTTACGATTTTGTCAATGAACGCAACGAATCTGTAGAGTTTGGGATCATCGGAGAATCTATCCGCTCTGCTATGACTGGTGGATTATCAGGGCGTATGGACTCGCTAGAGAACAGGCAGAAAGCCATTGAAAGCGGGTTGCCTGATTATCTCTTAAATGCGTCTGGTAACAAGGTCTGGTACCAGAAACCAGCTGAAGGAACAGAGCACAAAGTTGGTGACTTGTGGTTTGAAAAAAACGGACAATATGACCGCATGTACGTCTGGAATGGTGAGATGTGGGAGAAGCGCATTGATACCGAAGATGTGGATCGGGTCAAGAAAGACATTGACGAGAAGCTGAAACAATCCACAGAATCTATCCAGCAAGTCGAGAACAAAGCCTCCGAAGCCTTGACGAAGGCTGGGGCAATCATTGATAGCCAAGAGTTGCTGGATAAGATTAATGCCCATCTATATTCAGACACTAATAATGACGATAACGGAATTTTAGGTAGAAAATTTCGACAACAACGAGAGGCCAATAGGTCAACTCGAAATATAGCGACATCAACTAGAGATAAACTCACAGACTACCAACGCACGAACGACGAGAACCTAGTCCGCATTGGTCAGCAACTGGACAACACAGTCAGCAAGGCCGAGATGAAGCAGACGGCTGACGGTATCAGAGAGACGATAGCTAAAATCACCGTAGGAGCTCGAAACCTAATGGTCGGAACAAAAGATTTTTCTGGCGATTGGTTCAACAAGGCGAAATGGACGCTAGAAGACGAGAAATATTTAGGCTTGTCAGTATATAGCCGTCAGGAAGAATGGCTGGGCCTCTCTGAAATCGTTGAAGTACGAGTCGGTGAAACCTACACATTCAGTGCCTACGTTAAAAGTAGCATTGAAAATGACCTTGTCTTTATGTACTTAGATAATCGATTAGTAGAGCCTAGAGCTTCGCTGTCTTTGGTAAGAAAAGACATACAGGTCAGCACGAACTGGACGAGAGTGTCTGCAACGTTTTCGGTGACAAAAGCAGGGTTGATGACTCCTCGATTTGAGCGCAACAACAAGAACGCAAAACTGTATGTTGCAGGCTACAAGCTAGAACTGGGAAACGTACCGTCCGATTGGTCGCAAGCAATCGAAGATACCAATCAGATAATTGATGATAAAATCACGACTTTTGACCGTACGATAGACGGCATTAGAGCGACTGTCGCAGAAGCTAAGAGCTACATCGACGCAGACGGACAGAGAAGACAAGAGCTAAACCAGTTAATCAGAGACGAGACGGCTAAGGGCATTAATACAGTCTTATCTACTGTAGAGCAGTCAGGATATGCCAAGCGGACAGAGATACAGTCTATCACAGAGACACAAAGGCTCTATGACCGTATCATTGGCACAACGGAAGATGGCATCAAGCAGAACATCGCTCGGATGACGTTGACGGATAGTCTGTTTCAGACAGAAGTCTCAAAAGCAGTTAACAAAGAGCTGACACCGTCGAACTATGTGGCCAATCCGTTTACTATGTCTGATTACGTGAGGAAGTATAATGGAAACGGCAGTTCTGCAACTGTAACGCTATCGAGTACTGGCATAAATGTTTTTGGCAAGCTTGAGTTACATGCTCATTCTAAACTATTCTACAGTGATGCCATATGGTTGCCATTGACCCGTATACCAGAGAGTGTTAAGGATTTATCGTTCTCAATCATCATTGACGGCATTGATAAATGTAAGATTTCCGTGTACTTAGGGACAGAGAGATCCTCAACATATATCAACTATCAGCGACAGGATAACACGATTTATGGAACATTAACAGGTATCAATTCTGATTACAGAGGCTCTGATGGCGTGTATCTAAAACTCTCATTCGAGGGGCTAAATGGTCAGAGCGTGTTCCTTCAAAAGCCTATTGTGGTCGAAGGACGAGAACCTAAGTTTGACTTTGAAATAAACAAGCGGACAGAGCTAGACCAAGCTGTCCGAAGCGTCCAAACTCAACTAGCAGGATCTTGGTCTGTCAAAAATATAAATTCTGCTGGAGATTTAATCTCTGGTATTAATTTAGGGGCAGATGGTAGGAATCGTATTACTGGTAAGTTAACGCACATAACCAATGAGACGCTGATGGATAGGGCTAGTATTAAGAGTGCAGCGATCGAGAGTATAACAGCTGACCAGATAACCACTGGGACGCTTAATGCATCTCGTATCAATGTAATTAATCTCAATGCACGAAGTATCACGTCTGGAACATTCAGAGGGTTAGAGTATGAAGGTGGTATTATCCGAGGCAATAACGGAAATACCATCATCAATCTTAATACTAACATTACTACATACAACGGAACGGCTAGGATTGAGTTTAAATCAGCCCATAACAACTTGGTCTACAGCTCAAGCGGGACACATGCGTTTTTAGCACCAACTCAAAGGCAAGGCACATCTTATGCAGCATGGGCATTTGGCGTGGGTACTAGCAGTAGTCTTGACCCCAATGCTGGTTTTGTCGGATTGAAAATCTTCAACGACCCTGGCTCTCGCAAAGTCATACTGGTTGGCGATGTGCAGATTGTGAAAGATACGTTTACCCGAGATGCTCCAGCTACAGCATTAAGCGATGTATTATCTCAAATACAATACAATTTTGTGCAAATTAAAAATTGGTTCTCAAGGAATGACCTAGGTCACCCTGGTCTATATGACATCGAATTATAA

Genome Context

Tertiary structure

QBX25250.1
ColabFold structure
Source ColabFold
pLDDT 29.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank