Protein

View in Explore
Genbank accession
QBX25250.1 [GenBank]
Protein name
endopeptidase
RBP type
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKPILFNKNEQQFDTYGLGEIDVTTGNVTRERNGLYTFYAEYPANGPLASVLEKEMKIKADAGLRTKNQTFEISRIVKDSSGVLKIYGSHIKHKLEYMAVRHGINLSGTASVALAIWANNLIGDYRFSTWSDIDTTGSTTFTADKMTNAHLALGGVEGSILDVWGGEYEFDNLTVRLHKQLGRRAPTVLEYGRNIISAESDESIEESYTSVYPFATYTPESQGSDSTPAPVTVTIPGDYVDSKYISMYANRRIKVVDFSSEFKEKEIPTPDKLRTMAVKFMEHNKIGAPKINTKIEYVDLASTLDYQDNKIIEELEFCDIVPVYYPSIGITEDDAKVTKIVYDFVNERNESVEFGIIGESIRSAMTGGLSGRMDSLENRQKAIESGLPDYLLNASGNKVWYQKPAEGTEHKVGDLWFEKNGQYDRMYVWNGEMWEKRIDTEDVDRVKKDIDEKLKQSTESIQQVENKASEALTKAGAIIDSQELLDKINAHLYSDTNNDDNGILGRKFRQQREANRSTRNIATSTRDKLTDYQRTNDENLVRIGQQLDNTVSKAEMKQTADGIRETIAKITVGARNLMVGTKDFSGDWFNKAKWTLEDEKYLGLSVYSRQEEWLGLSEIVEVRVGETYTFSAYVKSSIENDLVFMYLDNRLVEPRASLSLVRKDIQVSTNWTRVSATFSVTKAGLMTPRFERNNKNAKLYVAGYKLELGNVPSDWSQAIEDTNQIIDDKITTFDRTIDGIRATVAEAKSYIDADGQRRQELNQLIRDETAKGINTVLSTVEQSGYAKRTEIQSITETQRLYDRIIGTTEDGIKQNIARMTLTDSLFQTEVSKAVNKELTPSNYVANPFTMSDYVRKYNGNGSSATVTLSSTGINVFGKLELHAHSKLFYSDAIWLPLTRIPESVKDLSFSIIIDGIDKCKISVYLGTERSSTYINYQRQDNTIYGTLTGINSDYRGSDGVYLKLSFEGLNGQSVFLQKPIVVEGREPKFDFEINKRTELDQAVRSVQTQLAGSWSVKNINSAGDLISGINLGADGRNRITGKLTHITNETLMDRASIKSAAIESITADQITTGTLNASRINVINLNARSITSGTFRGLEYEGGIIRGNNGNTIINLNTNITTYNGTARIEFKSAHNNLVYSSSGTHAFLAPTQRQGTSYAAWAFGVGTSSSLDPNAGFVGLKIFNDPGSRKVILVGDVQIVKDTFTRDAPATALSDVLSQIQYNFVQIKNWFSRNDLGHPGLYDIEL
Physico‐chemical
properties
protein length:1247 AA
molecular weight: 139362,38670 Da
isoelectric point:5,50050
aromaticity:0,08741
hydropathy:-0,45662

Domains

Domains [InterPro]
IPR007119
30–355
IPR007119 Coil G3DSA:2.60.120.260 IPR012892
QBX25250.1
1 1247
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan246
[NCBI] 		2548068 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25250.1 [NCBI]
Genbank nucleotide accession
MK448884 [NCBI]
CDS location
range 30858 -> 34601
strand +
CDS
TTGAAGCCTATTTTATTTAATAAGAATGAGCAACAATTCGACACTTACGGGTTGGGAGAAATTGATGTAACAACAGGAAATGTCACCCGCGAGAGAAACGGTCTCTACACGTTTTATGCGGAATATCCAGCTAATGGCCCTCTAGCCTCTGTCTTAGAAAAAGAAATGAAAATTAAGGCAGACGCTGGACTTCGGACGAAGAATCAGACTTTTGAAATATCCAGAATTGTCAAAGACAGTAGCGGAGTTTTGAAAATCTATGGTAGTCACATCAAGCACAAGCTAGAGTACATGGCAGTGCGTCACGGGATCAACCTAAGCGGTACAGCTTCCGTGGCTCTTGCCATCTGGGCTAATAATCTGATAGGTGACTATCGCTTTTCTACTTGGTCAGACATTGACACAACAGGTAGCACAACATTTACCGCAGACAAGATGACGAACGCACATCTTGCTCTCGGTGGTGTTGAGGGCTCTATTTTGGATGTCTGGGGCGGTGAGTACGAGTTTGACAACCTGACTGTCAGATTGCACAAACAGCTTGGTAGAAGAGCTCCTACGGTCTTAGAATACGGTAGGAATATCATATCAGCTGAGAGTGATGAATCTATTGAAGAATCGTATACCTCAGTCTATCCGTTTGCTACCTATACACCAGAGAGCCAAGGAAGCGATAGCACACCAGCTCCCGTCACGGTAACGATACCAGGCGATTATGTAGACAGTAAGTACATCAGTATGTACGCCAATCGACGTATAAAAGTAGTGGATTTCTCCAGCGAGTTTAAGGAGAAGGAAATTCCAACCCCTGACAAGCTGAGAACTATGGCAGTGAAATTTATGGAGCACAACAAGATTGGCGCTCCTAAAATCAATACTAAAATTGAGTATGTGGACTTAGCAAGCACACTTGATTATCAAGACAATAAGATTATCGAAGAGCTGGAGTTCTGCGACATCGTGCCAGTCTACTATCCATCTATCGGAATCACAGAGGACGATGCGAAAGTCACTAAAATTGTTTACGATTTTGTCAATGAACGCAACGAATCTGTAGAGTTTGGGATCATCGGAGAATCTATCCGCTCTGCTATGACTGGTGGATTATCAGGGCGTATGGACTCGCTAGAGAACAGGCAGAAAGCCATTGAAAGCGGGTTGCCTGATTATCTCTTAAATGCGTCTGGTAACAAGGTCTGGTACCAGAAACCAGCTGAAGGAACAGAGCACAAAGTTGGTGACTTGTGGTTTGAAAAAAACGGACAATATGACCGCATGTACGTCTGGAATGGTGAGATGTGGGAGAAGCGCATTGATACCGAAGATGTGGATCGGGTCAAGAAAGACATTGACGAGAAGCTGAAACAATCCACAGAATCTATCCAGCAAGTCGAGAACAAAGCCTCCGAAGCCTTGACGAAGGCTGGGGCAATCATTGATAGCCAAGAGTTGCTGGATAAGATTAATGCCCATCTATATTCAGACACTAATAATGACGATAACGGAATTTTAGGTAGAAAATTTCGACAACAACGAGAGGCCAATAGGTCAACTCGAAATATAGCGACATCAACTAGAGATAAACTCACAGACTACCAACGCACGAACGACGAGAACCTAGTCCGCATTGGTCAGCAACTGGACAACACAGTCAGCAAGGCCGAGATGAAGCAGACGGCTGACGGTATCAGAGAGACGATAGCTAAAATCACCGTAGGAGCTCGAAACCTAATGGTCGGAACAAAAGATTTTTCTGGCGATTGGTTCAACAAGGCGAAATGGACGCTAGAAGACGAGAAATATTTAGGCTTGTCAGTATATAGCCGTCAGGAAGAATGGCTGGGCCTCTCTGAAATCGTTGAAGTACGAGTCGGTGAAACCTACACATTCAGTGCCTACGTTAAAAGTAGCATTGAAAATGACCTTGTCTTTATGTACTTAGATAATCGATTAGTAGAGCCTAGAGCTTCGCTGTCTTTGGTAAGAAAAGACATACAGGTCAGCACGAACTGGACGAGAGTGTCTGCAACGTTTTCGGTGACAAAAGCAGGGTTGATGACTCCTCGATTTGAGCGCAACAACAAGAACGCAAAACTGTATGTTGCAGGCTACAAGCTAGAACTGGGAAACGTACCGTCCGATTGGTCGCAAGCAATCGAAGATACCAATCAGATAATTGATGATAAAATCACGACTTTTGACCGTACGATAGACGGCATTAGAGCGACTGTCGCAGAAGCTAAGAGCTACATCGACGCAGACGGACAGAGAAGACAAGAGCTAAACCAGTTAATCAGAGACGAGACGGCTAAGGGCATTAATACAGTCTTATCTACTGTAGAGCAGTCAGGATATGCCAAGCGGACAGAGATACAGTCTATCACAGAGACACAAAGGCTCTATGACCGTATCATTGGCACAACGGAAGATGGCATCAAGCAGAACATCGCTCGGATGACGTTGACGGATAGTCTGTTTCAGACAGAAGTCTCAAAAGCAGTTAACAAAGAGCTGACACCGTCGAACTATGTGGCCAATCCGTTTACTATGTCTGATTACGTGAGGAAGTATAATGGAAACGGCAGTTCTGCAACTGTAACGCTATCGAGTACTGGCATAAATGTTTTTGGCAAGCTTGAGTTACATGCTCATTCTAAACTATTCTACAGTGATGCCATATGGTTGCCATTGACCCGTATACCAGAGAGTGTTAAGGATTTATCGTTCTCAATCATCATTGACGGCATTGATAAATGTAAGATTTCCGTGTACTTAGGGACAGAGAGATCCTCAACATATATCAACTATCAGCGACAGGATAACACGATTTATGGAACATTAACAGGTATCAATTCTGATTACAGAGGCTCTGATGGCGTGTATCTAAAACTCTCATTCGAGGGGCTAAATGGTCAGAGCGTGTTCCTTCAAAAGCCTATTGTGGTCGAAGGACGAGAACCTAAGTTTGACTTTGAAATAAACAAGCGGACAGAGCTAGACCAAGCTGTCCGAAGCGTCCAAACTCAACTAGCAGGATCTTGGTCTGTCAAAAATATAAATTCTGCTGGAGATTTAATCTCTGGTATTAATTTAGGGGCAGATGGTAGGAATCGTATTACTGGTAAGTTAACGCACATAACCAATGAGACGCTGATGGATAGGGCTAGTATTAAGAGTGCAGCGATCGAGAGTATAACAGCTGACCAGATAACCACTGGGACGCTTAATGCATCTCGTATCAATGTAATTAATCTCAATGCACGAAGTATCACGTCTGGAACATTCAGAGGGTTAGAGTATGAAGGTGGTATTATCCGAGGCAATAACGGAAATACCATCATCAATCTTAATACTAACATTACTACATACAACGGAACGGCTAGGATTGAGTTTAAATCAGCCCATAACAACTTGGTCTACAGCTCAAGCGGGACACATGCGTTTTTAGCACCAACTCAAAGGCAAGGCACATCTTATGCAGCATGGGCATTTGGCGTGGGTACTAGCAGTAGTCTTGACCCCAATGCTGGTTTTGTCGGATTGAAAATCTTCAACGACCCTGGCTCTCGCAAAGTCATACTGGTTGGCGATGTGCAGATTGTGAAAGATACGTTTACCCGAGATGCTCCAGCTACAGCATTAAGCGATGTATTATCTCAAATACAATACAATTTTGTGCAAATTAAAAATTGGTTCTCAAGGAATGACCTAGGTCACCCTGGTCTATATGACATCGAATTATAA

Tertiary structure

PDB ID
a3fa442c9122e31776632567da4a81ee344eb8e7ad696422ee1f70187df2efd1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2376
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank