Protein

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Genbank accession
XAO36847.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPFAPIASLSDYSQAPTDGLQRANRSACKTGRHRVHSSWQLGRVLRHRYRQQAEMGRRIARQQFQGNRRFQQHNESLGGQPDRAVLERSNRPGDPGTSDPATKVDLNAANATNGNMIFNRIPGTGSGIASSGRAGAIDLQNGAHSGQAAAVTFERGGSIFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGTWRSRFHGIFAVLDNAAPTATVQPGVAVDGSILIYSSCAANYNSGQRPAGTWRCPWAM
Physico‐chemical
properties
protein length:261 AA
molecular weight: 27959,73450 Da
isoelectric point:10,30509
aromaticity:0,07663
hydropathy:-0,47701

Domains

Domains [InterPro]
DC_1924
RBD
8–258
DC_1924
XAO36847.1
1 261
Architecture
RBD
RBD 8-258 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO36847.1
1 261
Domain Start End Length (AA) Confidence
N-terminal 1 69 69 0,1121
Central domain 70 250 182 0,2286
C-terminal 251 261 10 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-69
Central
70-250
C-terminal
251-261

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage WP1
[NCBI] 		3136767 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO36847.1 [NCBI]
Genbank nucleotide accession
PP596839 [NCBI]
CDS location
range 70912 -> 71697
strand -
CDS
ATGCCATTCGCTCCAATCGCATCGCTGTCCGATTATTCTCAGGCCCCTACTGACGGTTTACAACGCGCCAACCGGTCCGCCTGCAAAACCGGCCGTCATCGCGTTCATTCGTCCTGGCAACTGGGGCGCGTTCTTCGGCATCGATACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAACAGTTCCAGGGAAATCGCCGATTCCAGCAACATAATGAATCTCTGGGCGGCCAACCCGACCGCGCCGTCCTGGAACGGTCAAACCGACCTGGCGATCCGGGAACTTCTGATCCGGCAACGAAAGTGGACCTGAACGCCGCGAACGCTACCAACGGCAACATGATCTTCAACCGCATTCCTGGAACTGGTAGCGGCATAGCTTCGTCAGGTCGAGCTGGCGCCATCGACCTGCAGAATGGGGCGCATTCGGGGCAAGCGGCAGCAGTCACTTTCGAGCGGGGCGGCAGTATCTTCGTCAACTTCGGCTTGGATACCGACAACGTTCTCAAAGTAGGTGGCGGAAACCTGGGGGCAAATGCCTATCCGGTCATCCACGCCGGGAACTACAATAACTACATCAACCAGGCGCTGGTTCAGGTGGGTACTTGGCGGAGTCGGTTCCATGGCATCTTTGCGGTCCTGGACAATGCCGCTCCAACCGCGACCGTTCAACCGGGAGTGGCCGTGGACGGTTCCATTCTCATCTACTCGTCCTGCGCCGCAAACTACAATAGCGGCCAAAGGCCTGCCGGAACTTGGCGCTGTCCATGGGCCATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5d409a98e1ed9792d43b68af334de257b865892b32dd13379cfb04cecfb09881
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4432
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Combinations of novel bacteriophage are efficacious against Multidrug-resistant Pseudomonas aeruginosa and enhance sensitivity to carbapenem antibiotics Kovacs,C.J., Rapp,E.M., Rankin,W.R., McKenzie,S.M., Brasko,B.K., Hebert,K.E., Bachert,B.A., Kick,A.R., Burpo,F.J. and Barnhill,J.C. 2024-06-21 — GenBank