Phage RBP Database

Genbank accession

WPJ53598.1 [GenBank]

Protein name

L-shaped tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

Seq2Symm

C2 confidence 0,767

C2	0,767
C3	0,194
C4	0,005

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MNDVREHCGLTVQRAMEIMESFGLEPFKYGFICYDKWDEQTVVSEYGPANEGGSENPIYKTIPAGDRYSFRIDELNMFIAKGFEARLSALEDKLGM

Physico‐chemical properties

protein length:	96 AA
molecular weight:	10969,27960 Da
isoelectric point:	4,59051
aromaticity:	0,12500
hydropathy:	-0,42188

Domain architecture

WPJ53598.1

1 96 aa

RBD 2–95 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036388
RBD

IPR036388

WPJ53598.1

196 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0924
STR

DC_0924

WPJ53598.1

196 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036388	RBD	IPR036388	2	95	Merged direct domain	Winged helix-like DNA-binding domain superfamily	C-terminal	Low	Positional only	96 proteins / 96 hits

Proteins with similar domain architecture

Phage

Klebsiella phage RCIP0065 [NCBI] · taxon 3094233

Viruses

Host

Klebsiella pneumoniae [NCBI] · taxon 573

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

WPJ53598.1 [NCBI]

Genbank nucleotide accession

OR532859.1 [NCBI]

CDS location

range 20199 -> 20489
strand -

CDS

ATGAACGACGTGCGCGAGCACTGCGGTTTGACCGTACAGCGTGCTATGGAGATCATGGAAAGTTTTGGTCTTGAGCCGTTTAAATATGGCTTCATCTGTTATGACAAGTGGGATGAGCAAACGGTGGTTTCAGAATATGGGCCAGCGAATGAAGGCGGGTCGGAAAACCCGATCTACAAAACCATCCCGGCTGGTGATCGCTACTCGTTCCGCATTGATGAGTTAAACATGTTTATCGCAAAAGGATTTGAAGCTCGTTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)