Phage RBP Database

Genbank accession

YP_009852357.1 [GenBank]

Protein name

tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,41

Protein sequence

MANVWYIGDAQTREITLGGQIFTWNVWNGWSIPESAFTSGQLAELDADPGFLLGQTGPRALPPWTADPVTGRESVYLQTIKQIVDTLPAQLSGKISNLKLIEDGDVRVPLSFDGPVEEDYLEVFVDLLNRLSLGIRKNGSVEIPRILTKSVEFMDGNLQSFPEDRFASGTVDAAGRVAEDAIDQYGRKPDWILSRWKSRMAALSGASTLPMDIIVGGGQSNMGSTSDTFATGVDLPPVNPNVYLWNNSQIVRIADMSESSQKSFVPRAIYAFADEYARKYLKPGRAVLIVNSGVGSSGFSTTTISPAPSGYKNVLNGDNSVNQNVGTWEVQNAIADPVHLYGRMITATKAAKAAAPAGSSYVAFLWSQGESDTTWRSQAQYSSLLDELIAGVRSELGVQIPALIGSMNPNWVDENSNRKDVQTALEDTPRRVEKSAYAFGPYDLGDLQSNIHWAAQGQLARGPIFLSAYDRARWNVAATEPQPPQNLAVKRYGPNIQITWEHPPCGFTSFTLEHKIDSGSWTAISLPANSSPRSINVGLSLTASQVVSIRMRTVNSVGTSGYTREVLA

Physico‐chemical properties

protein length:	568 AA
molecular weight:	61715,47100 Da
isoelectric point:	5,15054
aromaticity:	0,08803
hydropathy:	-0,23380

Domain architecture

YP_009852357.1

1 568 aa

STR 210–568

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036514
STR

IPR036514 IPR036116

IPR036514
STR

IPR036514 IPR013783

SSF52266
STR

SSF52266 IPR003961

IPR005181
ENZ

IPR005181

YP_009852357.1

1568 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0328
STR

DC_0328

YP_009852357.1

1568 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036514	STR	IPR036514	210	477	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
IPR036514	STR	IPR036514	211	477	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
SSF52266	STR	SSF52266	211	475	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
IPR005181	ENZ	DC_0247	270	469	InterPro cluster	Sialate O-acetylesterase domain	Central	High	Text match	78 proteins / 79 hits
IPR036116	STR	IPR036116	478	564	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR013783	STR	IPR013783	478	565	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	480	568	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits

Proteins with similar domain architecture

Phage

Gordonia phage Gibbin [NCBI] · taxon 2599843

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

YP_009852357.1 [NCBI]

Genbank nucleotide accession

NC_048812 [NCBI]

CDS location

range 3409 -> 5115
strand +

CDS

ATGGCCAACGTTTGGTATATCGGAGATGCCCAGACTCGCGAGATCACCTTGGGTGGGCAGATATTCACGTGGAATGTTTGGAATGGTTGGTCCATTCCGGAATCGGCGTTCACCTCTGGGCAGCTAGCTGAACTTGATGCTGACCCTGGTTTCCTGTTGGGCCAGACCGGACCGCGGGCACTGCCGCCTTGGACCGCTGACCCGGTTACGGGTCGTGAGTCTGTCTATCTCCAGACCATCAAGCAGATCGTTGACACGCTACCGGCCCAGCTCTCTGGCAAAATCTCTAACTTGAAGCTGATCGAGGATGGTGACGTTCGTGTCCCACTTAGCTTTGATGGGCCAGTTGAAGAGGACTATCTGGAGGTTTTCGTTGACCTGTTGAATCGTTTGTCCTTGGGCATTCGTAAAAATGGGTCCGTTGAGATCCCCCGTATTCTCACCAAGTCGGTCGAGTTCATGGATGGCAATCTTCAGTCTTTCCCTGAGGATCGTTTTGCTTCTGGAACGGTAGATGCCGCTGGGCGTGTGGCCGAAGACGCGATTGATCAGTATGGCCGTAAGCCAGATTGGATTCTGTCTCGGTGGAAGTCCAGGATGGCAGCATTGTCAGGTGCCTCGACGCTCCCGATGGATATCATCGTTGGCGGTGGCCAATCCAATATGGGGTCGACGTCAGATACTTTCGCCACCGGAGTGGATCTTCCGCCTGTCAATCCGAATGTGTATCTGTGGAACAATTCCCAGATAGTTCGCATAGCTGATATGTCAGAGTCCAGCCAGAAGTCATTCGTTCCACGGGCCATCTATGCCTTTGCAGATGAGTACGCCAGGAAGTACCTCAAGCCGGGTCGGGCCGTGTTGATCGTGAACTCTGGCGTTGGATCATCTGGCTTCTCGACAACTACGATTTCACCGGCCCCCAGCGGGTACAAGAATGTTCTCAATGGCGACAATAGCGTCAACCAAAACGTAGGCACATGGGAGGTCCAGAATGCCATCGCTGACCCAGTTCACCTATATGGCCGTATGATTACGGCCACGAAGGCAGCGAAGGCAGCAGCCCCAGCAGGATCATCCTACGTCGCATTCCTCTGGTCCCAGGGCGAGTCCGACACAACCTGGCGGAGCCAGGCGCAGTATTCATCGCTGTTGGATGAGCTTATTGCTGGTGTTCGGTCAGAGCTTGGTGTTCAGATTCCGGCCTTGATTGGTTCAATGAATCCGAATTGGGTTGATGAGAACTCCAATCGAAAAGACGTCCAGACCGCTCTGGAAGACACTCCTCGTCGAGTGGAAAAGAGTGCCTATGCATTTGGGCCATATGACCTGGGCGATCTTCAGTCAAACATTCACTGGGCCGCGCAGGGGCAGTTGGCCCGTGGACCAATCTTCCTTTCAGCTTACGACCGTGCTCGGTGGAACGTTGCAGCCACGGAGCCGCAGCCACCCCAGAATCTGGCAGTAAAGCGGTATGGTCCGAATATTCAGATCACTTGGGAACATCCTCCATGTGGCTTTACGTCATTCACTTTGGAGCACAAGATTGACTCTGGCTCCTGGACGGCGATTTCGCTCCCGGCCAATTCATCGCCTCGTTCGATCAACGTCGGGCTAAGCCTCACCGCATCCCAAGTCGTGTCGATACGGATGAGGACTGTCAACAGCGTCGGAACATCCGGATACACCAGAGAGGTGCTTGCATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)