Protein

View in Explore
Genbank accession
WYW00581.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Seq2Symm
C6 confidence 0,986
C6 0,986
C3 0,005
C10-C17 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFPNQGAQQINGWSSETQGLQKRPPTKFIKRLGAPGSWGAKPLVHLVNRDASEQYYMVFTGGGVAIVDLQGNSYQVRGYDGYANCADPRGDLRLITVADYTFVVNRRTVVQMGNELTHAGYRNLNTRALVPCRGGQYGRTVTVEVLIDVTWVKLAELALPSGVGEPGVVEGMVAKVDAQNMIKELVTQVNTNGAPWKITAGEYPGCMLLHRDDGGEFGGIRTKDGYADQLINGFIYQVQSFNKLPAQAPEGYLVEITGEATRSGDNYWVRYDGAGRVWKETVKPGIIAGLNRATMPRGLVRAADGQFDWKVLDWNNRGCGDNETNPLPSFVDGTINDVFFFRNRLGFLSGENVILSRSSRYFNFFPPSVASLSDDDPLDIAVSHNRISILKYAVPFSEQLLLWSDQAQFVLSSQGILSPKTVELDLTTEFDVQDTARPFGIGRGVYFSAPRAAYTSLKRYYAVQDVSDVKNAEDVSAHVPSYIENRVFNIHGSGTENYVTLLSDGAPGIVYIYKFLYMAEDIAQQSWSHWEFGTQVNILACASIGSYMYILMDRPEGIVLERMEFTAFTKDFPVEPYRTYIDGKVTTVCSEFDEDLFLSYINLSSLYGGAPGAQESYWTIDTDGVGQQHAPPKGGWASDPRIVLQGDQRGKTYIVGRSYTFLYEFSKFLIKQTADDGSTATEDIGRLQLRRAWLNYESSGSFEINVNNNNGRNTDNDFVYVMAGGRLGAEVRLGELNLGTGQFKFPVTGNAQNQRVTIVSDTPNPLNVIGCGYEGNYIRRSSGI
Physico‐chemical
properties
protein length:806 AA
molecular weight: 89113,98290 Da
isoelectric point:5,35352
aromaticity:0,11042
hydropathy:-0,28474

Domains

View on InterPro
Domain architecture
WYW00581.1
1 806 aa
TTP 1–806
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WYW00581.1
1 806 aa
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9925
Central domain 147 356 211 0,0669
C-terminal 357 806 449 0,1185
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pseudomonas phage vB_PpuP-Torve [NCBI] · taxon 3132637
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Pseudomonas putida KT2440 and [NCBI] · taxon 1481724
Heterolobosea Eutetramitea Lyromonadida Psalteriomonadidae Monopylocystis

Coding sequence (CDS)

Genbank protein accession
WYW00581.1 [NCBI]
Genbank nucleotide accession
PP496433 [NCBI]
CDS location
range 25130 -> 27550
strand +
CDS
ATGGGTCTGGTTAGTCAGTCCGTAAAGAACCTGAAGGGTGGCATTAGCCAACAGCCGGACATCCTCCGGTTCCCCAATCAGGGTGCGCAACAAATCAACGGCTGGTCGAGCGAGACCCAAGGTCTTCAGAAGCGACCGCCAACGAAGTTCATTAAGCGTCTCGGGGCACCGGGTTCGTGGGGCGCTAAGCCTCTCGTCCACTTGGTCAACCGTGATGCGTCCGAACAGTATTACATGGTGTTCACTGGTGGCGGTGTTGCCATTGTGGACCTTCAAGGGAACAGCTATCAGGTTCGTGGTTATGACGGATACGCCAACTGTGCGGACCCTCGTGGTGACCTGCGCCTGATCACTGTGGCCGACTACACGTTCGTTGTGAATCGCCGCACCGTTGTCCAGATGGGCAATGAGCTGACCCATGCTGGTTACCGCAACCTCAACACACGGGCGCTCGTTCCGTGCCGTGGTGGTCAGTATGGGCGAACGGTCACCGTTGAGGTTCTTATCGACGTGACGTGGGTGAAGCTGGCCGAGCTGGCCCTGCCTTCGGGTGTGGGCGAGCCGGGTGTGGTCGAGGGCATGGTTGCCAAGGTCGATGCGCAGAACATGATCAAGGAGCTGGTGACCCAAGTGAACACTAATGGCGCTCCATGGAAGATCACCGCTGGCGAGTATCCGGGCTGCATGTTGCTTCACCGCGATGACGGTGGAGAGTTTGGTGGTATCCGCACCAAGGATGGCTACGCTGACCAGTTGATCAATGGCTTCATCTATCAGGTCCAGTCGTTCAATAAGTTGCCCGCTCAGGCCCCTGAAGGTTACCTCGTGGAAATCACCGGGGAAGCCACACGCTCAGGCGACAACTACTGGGTCCGTTACGATGGCGCTGGCCGAGTCTGGAAGGAAACCGTTAAGCCGGGGATCATCGCTGGGTTGAACCGGGCGACAATGCCTCGTGGTCTGGTCCGTGCGGCTGACGGTCAGTTTGACTGGAAGGTCCTCGACTGGAACAACCGTGGCTGTGGTGACAATGAGACCAACCCGCTGCCATCCTTCGTGGACGGTACGATCAACGACGTGTTCTTCTTCCGTAACCGTTTGGGGTTCCTCTCAGGCGAGAACGTGATCTTGAGCCGGTCGAGTCGGTACTTCAACTTCTTCCCACCAAGCGTGGCGAGCCTGTCCGATGATGACCCACTGGACATAGCGGTATCCCACAACCGTATCTCGATCCTCAAGTACGCCGTACCGTTCTCTGAACAGTTGCTGCTGTGGTCTGACCAAGCTCAGTTCGTGTTGTCCTCTCAGGGCATCCTGTCTCCCAAGACGGTGGAACTGGACCTGACCACTGAGTTCGACGTACAGGACACTGCTCGGCCTTTCGGTATCGGACGTGGTGTGTACTTCTCGGCCCCTCGGGCTGCCTATACGAGCCTCAAGCGTTACTACGCAGTGCAGGACGTATCGGACGTGAAGAACGCCGAGGACGTATCAGCGCACGTTCCGAGCTACATCGAGAACCGGGTGTTCAACATCCACGGCTCGGGTACGGAGAACTATGTGACCCTGCTGTCTGATGGGGCACCGGGCATCGTGTACATCTACAAGTTCCTCTACATGGCTGAAGACATCGCGCAACAGTCGTGGAGTCACTGGGAGTTCGGTACTCAGGTCAACATCCTTGCCTGTGCGTCGATTGGCTCCTACATGTACATCCTGATGGATCGCCCTGAAGGGATCGTACTGGAGCGCATGGAGTTCACAGCGTTCACCAAGGACTTCCCTGTGGAGCCTTATCGGACCTACATCGACGGGAAGGTGACAACCGTGTGCAGTGAGTTCGATGAAGACTTGTTCTTGTCGTACATCAACCTGTCCAGCCTGTATGGTGGCGCACCGGGCGCACAGGAATCCTACTGGACCATCGACACGGATGGCGTAGGGCAGCAACACGCACCTCCGAAAGGTGGCTGGGCGAGCGACCCACGGATCGTCCTTCAGGGTGACCAACGGGGCAAGACGTACATCGTTGGCCGTTCCTACACGTTCCTCTATGAGTTCTCGAAGTTCCTGATCAAGCAAACCGCTGATGATGGGTCCACGGCAACTGAGGACATTGGTCGGTTGCAACTCCGTCGAGCTTGGCTGAACTACGAGTCTTCGGGTTCGTTCGAGATCAACGTGAACAACAACAATGGCCGCAACACGGACAACGACTTCGTGTACGTCATGGCTGGTGGCCGACTCGGCGCTGAGGTTCGCCTCGGTGAACTGAATCTCGGGACTGGTCAATTCAAGTTCCCGGTAACGGGTAACGCCCAGAACCAACGGGTGACCATCGTGAGCGACACACCGAACCCACTTAACGTGATCGGCTGTGGCTATGAGGGTAACTACATCCGTCGATCCAGCGGTATTTAA

Genome Context

Tertiary structure

WYW00581.1
ESMFold2 structure
Source ESMFold2
pLDDT 88.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — 38863081 GenBank