Protein

View in Explore
Genbank accession
YP_007672702.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,49
Protein sequence
LKNRAAIWKVVNEANSEIQIKATENAAVELYYDHSKKLETYASGCYVYGKVALQGSEDGNAIIEMFADEGDDAADKYQLASITNGNWEVQNYSSGSAWETNIRATGGGAVSLFYNDAKKIETAGGGINITGDVYHNTDNGSAYFGAGNDLRIYHDGGNSFLANTGGNLYIRNNTAGTPVFYLQVGDSNEDALKATFNGAVELFYNNVRKLYTDNGGVVVQGNLYLSDADDRKAIFGAGQDLQIWHDGSHSHIQHENTGNLYVLCKSGQINFETASETMTQMIPNGKVNLYYDNVKKFETDSYGAKVIGNLVVGTDAGELLFTNPDGHSPKFKENGGALEVWTNNAKRWTVESNGNNVYEDDVKIFFGSGNDLRLWHDGSSSFIKNYTGDFIIENTGTGNVQINPDSTGTGILLTKDAGVDLYYDGAKKFETTSNGATFTGTSLVTFAGDDNRYIDFEGNGNNRSVTFRSRDGGANDSFAQFTANGSVYLYYDNNLKLSTVSGGVRIDNGNLLLDRDNAYIKLGASDDLQIYHDGSNSYIKQVSGATGDLLIFADGHDIELIPKSGEPGLNVKPDGAVELYYDGIKKCETVSDGLLLQGVEGGNAAITMESDEGDDHDDKWQIQAASDHTFHLKHKAGNSWKTAWYTWTDSNIGYPVFRASKGGIRFDDGLDNVNSDQWNAYGGDGHAHRTAGQAYITADDHMRFRKNGNAENKRFDLRTDTGNGQAQNDWQDDQFDFAEFFEWSDGNPNGEDRIGHTVAVDGLTGKIKIAAEGDAVIGVVSGTAAFTANCAAMGWHGKYIRDEWGRYRFDLVKDEDGNQLYSDLNKKHEKITLVENPDWDQTKEYYSRDERKEWDKIGIIGQCYVRKAAVIPSSWIKLKEIDSTKDFYLIK
Physico‐chemical
properties
protein length:891 AA
molecular weight: 97993,81660 Da
isoelectric point:4,77012
aromaticity:0,11111
hydropathy:-0,60337

Domains

View on InterPro
Domain architecture
YP_007672702.1
1 891 aa
CHP 705–735 · RBD 736–812 · CHP 813–866 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_007672702.1
1 891 aa
Domain Start End Length (AA) Confidence
N-terminal 1 785 785 0,0022
Central domain 786 880 96 0,3412
C-terminal 881 891 10 0,3083
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Prochlorococcus phage P-SSP10 [NCBI] · taxon 885867
Uroviricota Caudoviricetes Autographivirales Tangaroavirus Tangaroavirus PSSP10
Host
Prochlorococcus marinus str. NATL2A [NCBI] · taxon 59920
Bacteria Cyanobacteria Prochlorales Prochlorococcaceae Prochlorococcus

Coding sequence (CDS)

Genbank protein accession
YP_007672702.1 [NCBI]
Genbank nucleotide accession
NC_020835 [NCBI]
CDS location
range 44650 -> 47325
strand -
CDS
TTAAAGAATAGAGCAGCTATTTGGAAAGTTGTTAATGAAGCTAATAGTGAAATACAAATTAAAGCTACAGAAAATGCAGCAGTAGAACTCTATTATGACCACTCAAAGAAGCTGGAAACCTATGCTTCTGGATGCTATGTTTATGGTAAAGTTGCACTTCAAGGTTCTGAGGATGGTAATGCTATTATCGAAATGTTTGCTGACGAAGGTGACGATGCAGCAGATAAATACCAATTAGCATCTATTACTAATGGTAATTGGGAAGTACAAAACTATTCAAGTGGAAGTGCTTGGGAAACAAATATAAGAGCAACTGGTGGTGGAGCAGTATCACTTTTTTATAATGATGCTAAGAAGATTGAAACCGCAGGTGGTGGTATTAACATCACTGGCGATGTTTATCATAACACTGATAATGGTAGTGCTTACTTTGGCGCTGGTAATGATTTAAGAATCTATCACGATGGAGGAAATAGCTTCCTAGCAAATACAGGTGGTAATTTATATATAAGAAATAACACTGCTGGTACTCCAGTATTTTATTTACAGGTTGGTGATTCAAATGAAGACGCTCTAAAAGCTACATTTAACGGAGCCGTAGAACTCTTTTATAACAATGTTAGGAAACTATACACAGATAACGGTGGTGTAGTTGTTCAAGGAAACTTATATCTTTCAGATGCTGATGACCGCAAAGCTATATTTGGAGCAGGGCAGGATCTACAAATTTGGCATGACGGCAGCCACTCGCATATTCAACACGAAAACACTGGAAACCTATATGTTCTTTGTAAGTCTGGTCAGATAAACTTTGAAACTGCTTCTGAGACAATGACTCAGATGATACCTAATGGTAAAGTCAATCTCTATTACGACAACGTTAAGAAGTTTGAGACAGATAGTTACGGAGCAAAGGTTATTGGCAACTTAGTTGTTGGTACTGATGCTGGAGAACTACTATTTACTAATCCAGATGGTCATAGTCCTAAGTTTAAGGAAAATGGTGGTGCATTAGAGGTTTGGACTAATAATGCAAAACGATGGACAGTTGAATCTAACGGTAATAATGTTTACGAAGATGATGTAAAAATATTCTTTGGTAGTGGAAATGATTTAAGACTTTGGCATGATGGCTCTTCTTCTTTTATAAAAAATTACACTGGTGATTTTATAATTGAAAACACAGGAACAGGTAATGTTCAAATAAATCCTGATAGTACGGGAACTGGTATTCTTCTTACTAAGGATGCAGGTGTTGACCTATATTACGACGGTGCTAAGAAGTTTGAGACAACGAGTAATGGAGCTACTTTTACGGGAACAAGTCTCGTTACATTTGCTGGAGATGATAACAGGTACATTGATTTTGAAGGTAATGGTAATAATAGAAGCGTTACGTTCAGGAGTAGAGATGGTGGTGCGAATGATTCTTTTGCACAATTCACTGCCAATGGCTCAGTATATCTCTATTACGATAATAATCTAAAGCTATCTACAGTTTCTGGTGGAGTTAGAATAGACAACGGTAATCTTCTTTTAGATAGAGATAATGCTTATATAAAACTCGGTGCTAGTGATGATTTGCAGATTTATCACGATGGAAGCAATAGTTATATAAAACAGGTTAGTGGTGCTACTGGTGATTTATTAATCTTTGCAGATGGTCACGACATAGAACTTATACCAAAATCTGGTGAGCCTGGTCTAAATGTTAAACCTGATGGAGCAGTCGAGCTCTATTACGACGGTATTAAAAAATGTGAAACAGTTTCAGATGGATTATTACTGCAGGGTGTTGAAGGTGGTAATGCTGCCATCACAATGGAGTCTGATGAAGGTGATGACCATGACGACAAATGGCAAATACAAGCTGCATCCGATCACACATTCCATCTTAAACATAAAGCAGGTAATTCTTGGAAAACAGCTTGGTATACTTGGACTGATAGCAATATAGGTTACCCTGTATTTAGAGCGTCGAAAGGTGGTATAAGATTTGATGATGGGTTAGATAATGTCAACTCAGATCAATGGAACGCCTATGGTGGAGACGGACATGCCCATAGAACAGCTGGTCAAGCATATATAACAGCTGATGACCACATGAGGTTTAGAAAGAACGGTAACGCAGAGAATAAGAGGTTTGATTTAAGAACTGATACTGGTAACGGACAAGCTCAGAATGATTGGCAAGATGACCAGTTTGACTTTGCTGAATTCTTTGAATGGTCTGATGGTAATCCTAATGGAGAAGATCGTATAGGACATACCGTAGCTGTAGATGGCTTAACAGGTAAGATAAAGATAGCTGCAGAAGGTGATGCTGTTATAGGTGTTGTCTCTGGTACTGCTGCCTTTACTGCTAACTGTGCAGCTATGGGATGGCATGGTAAATATATCCGTGATGAATGGGGTAGATACCGCTTTGATCTAGTTAAAGATGAAGATGGTAATCAACTTTATAGTGATCTAAATAAGAAACATGAAAAAATAACTTTAGTTGAAAACCCTGACTGGGATCAAACTAAAGAATATTATTCTAGAGACGAAAGGAAAGAGTGGGATAAGATTGGTATTATTGGACAGTGTTATGTCCGAAAAGCAGCGGTTATTCCTTCTAGCTGGATAAAATTGAAGGAAATTGATTCAACAAAAGACTTTTATCTTATTAAATAA

Genome Context

Tertiary structure

YP_007672702.1
ESMFold structure
Source ESMFold
pLDDT 66.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP10 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank