Phage RBP Database

Genbank accession

YP_010102468.1 [GenBank]

Protein name

tail protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,91

Seq2Symm

C3 confidence 0,990

C3	0,990
C1	0,890
I	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADNIEIEQRVLDGDLIGPVNAEIDTEDFTGRVALENSLLDGTGSEISVELSESLGVVGIDDLVEVKAEIDKSVLKAESTVTEAQRQIDKANATIASLNAISTQITNLVGEAKQAASTATNEAADAERSENAAAGSAKAASDSQSAAAGSAKAASDSQNAAAESQAQALASQKASKTSETNASGSEARTLQSEKNAAASAKEADTDQKAALAAQKAAELARDVAKSSENKSSTYAGNAYSSKTDAETALAAAKKSEAAAAQSAKEAETSASSMTQSVADTSAARDAAIAARDRSESARDTSVSQASLATTKASEASSSASSASSSASAAKTSETNALNSQRAAKTSETNSKTSETNSKESERVALASKDAAAKSAADANASAADAKKSQDAAKASRDEAEHFAVELRKGSVYRGIWNPNSNKYPDVPPTNSRWDVQLNKGQLEKIFDGKEWNWGDRLIYVLETKSFDIIDSGTGVTSINGETGSVTINRDTLGALGKTEKAADSAKLEGSSKAQIIAKAREGLGASGTSYTKAESDSKYLPKVGKAADSNLIDGIDSSRLVYGYNQYGTTISTDLNTNDKSNFIEMKDAVTTNKPGRATSWVWGWQTSHSYNSDTRRFGAQLVVNQDNQAYYRIQDINGFGTWAHIYSTANKPTAADVGAYSKSEADGKYFQKEILASRDFAKPDFEPASLPSGNYRENSVSGSLGQVAWFNGSGTSTGGFGVQVGYNYAPRIISYTDTNKTRKVEHILYTNLNKPTLEDVAKTTTTVKNLQLASNTWTTLLGKTDGLTETGVYQILVTYSSYQQGGGAYLQHYTGQFAWYAGNTNSPNTSEIPLHHMGHADSGEYIYLRTQIRMGNKGDQTVDIKCNKSHTKPVAFTVKLVKIM

Physico‐chemical properties

protein length:	885 AA
molecular weight:	93487,92720 Da
isoelectric point:	5,39853
aromaticity:	0,06102
hydropathy:	-0,57977

Domain architecture

YP_010102468.1

1 885 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil Coil

YP_010102468.1

1885 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0840
STR

DC_0840

YP_010102468.1

1885 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	74	101	Coils	Coil	-	-	-	-
Coil	Unmapped	-	109	129	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Vibrio phage Brizo [NCBI] · taxon 2590896

Uroviricota Caudoviricetes Demerecviridae Thalassavirus Thalassavirus brizo

Host

Vibrio campbellii ATCC BAA-1116 [NCBI] · taxon 2902295

Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio campbellii

Genbank protein accession

YP_010102468.1 [NCBI]

Genbank nucleotide accession

NC_055800 [NCBI]

CDS location

range 27232 -> 29889
strand +

CDS

ATGGCAGATAATATTGAAATTGAACAAAGAGTGTTAGACGGGGACTTAATTGGGCCTGTCAATGCTGAAATAGATACTGAAGATTTCACTGGTCGAGTAGCTCTAGAGAATAGTCTACTAGACGGTACTGGCTCTGAAATCTCAGTAGAACTATCAGAAAGCCTTGGAGTCGTTGGTATCGATGACTTAGTAGAGGTTAAGGCTGAAATAGATAAGTCTGTATTAAAAGCTGAGTCAACAGTAACTGAGGCTCAGAGACAGATTGATAAAGCCAACGCCACTATCGCTTCTCTCAACGCTATCAGCACTCAAATAACTAATCTAGTAGGTGAGGCTAAACAAGCAGCATCTACCGCTACTAATGAGGCTGCGGATGCTGAAAGAAGTGAAAATGCAGCGGCTGGTAGTGCAAAAGCTGCATCTGATTCTCAAAGTGCAGCAGCAGGTAGTGCAAAAGCTGCATCTGACTCACAAAATGCAGCAGCAGAAAGCCAAGCCCAAGCTTTAGCATCTCAAAAAGCTTCCAAGACCTCTGAAACCAATGCTAGTGGTTCTGAAGCTAGAACATTACAAAGCGAGAAAAATGCAGCCGCATCGGCAAAGGAAGCTGATACAGATCAAAAAGCAGCACTGGCAGCTCAAAAAGCAGCAGAACTAGCAAGAGATGTTGCCAAATCTAGCGAGAATAAGTCCAGTACATATGCAGGTAATGCTTACAGTTCTAAGACAGATGCAGAAACAGCCCTAGCAGCAGCTAAGAAATCAGAAGCTGCTGCGGCACAATCAGCTAAAGAAGCCGAAACGTCAGCATCCTCTATGACTCAATCTGTAGCGGACACCAGTGCAGCTAGAGATGCTGCTATAGCTGCTAGAGATCGTTCAGAGTCGGCTAGAGATACTTCAGTTAGTCAAGCTAGCTTAGCTACCACAAAAGCCTCAGAAGCTTCTTCTAGTGCATCAAGTGCTTCTTCTAGCGCATCAGCAGCAAAAACTAGCGAAACAAATGCTCTAAACAGCCAACGTGCAGCTAAGACTTCTGAGACAAATTCAAAAACCTCAGAGACTAATTCAAAAGAGTCTGAAAGGGTTGCTTTGGCCTCGAAAGATGCCGCAGCTAAAAGTGCGGCAGATGCTAACGCCAGTGCAGCAGACGCTAAAAAGTCTCAAGATGCTGCTAAGGCCTCACGTGACGAGGCAGAACATTTTGCAGTGGAGCTACGTAAAGGTAGTGTATATAGAGGTATTTGGAATCCAAACTCTAATAAGTACCCAGATGTTCCACCAACTAACTCTCGTTGGGACGTACAGCTTAACAAAGGGCAATTAGAGAAGATATTTGATGGTAAAGAATGGAACTGGGGTGACAGATTAATATATGTATTAGAAACCAAATCCTTCGATATAATCGACTCTGGTACAGGTGTTACTAGCATTAATGGCGAAACCGGATCAGTTACTATCAATAGAGATACTCTAGGTGCTCTAGGTAAAACTGAAAAGGCAGCAGATAGTGCTAAGTTAGAAGGAAGCAGCAAAGCCCAAATCATTGCTAAAGCTCGTGAAGGGCTTGGGGCTTCTGGTACTAGCTATACTAAGGCGGAGTCTGATAGCAAATACTTACCTAAAGTAGGAAAAGCAGCTGATTCTAATCTGATAGATGGTATAGATTCTTCTAGGTTAGTTTACGGGTATAACCAGTATGGTACTACTATATCAACTGACCTTAATACTAATGATAAGTCAAATTTCATTGAAATGAAGGATGCAGTAACAACTAATAAACCTGGTAGAGCAACTTCTTGGGTTTGGGGCTGGCAAACTAGTCACTCATATAATAGTGATACTAGAAGATTCGGGGCTCAGTTAGTAGTTAACCAAGATAATCAAGCCTACTATAGAATACAGGATATTAATGGTTTTGGTACTTGGGCACATATTTACTCTACAGCTAATAAACCTACAGCTGCTGATGTGGGAGCATACAGTAAATCAGAAGCAGATGGTAAATACTTCCAAAAAGAAATACTTGCATCTCGTGATTTTGCCAAGCCGGACTTTGAGCCCGCTAGTCTACCATCTGGAAACTATAGAGAGAACTCTGTATCAGGATCTCTAGGGCAGGTGGCTTGGTTTAATGGATCAGGCACCTCTACAGGTGGTTTTGGTGTACAAGTAGGATATAATTATGCGCCACGAATTATATCATATACTGATACTAATAAGACTAGAAAAGTAGAACATATATTATATACAAACCTTAATAAACCAACACTAGAAGATGTTGCCAAAACTACTACTACCGTTAAGAATTTACAACTAGCCTCGAATACTTGGACTACTCTACTAGGTAAAACTGACGGTCTTACAGAGACAGGAGTTTACCAGATATTAGTAACATATTCATCTTACCAACAAGGTGGTGGGGCTTACCTTCAACACTATACTGGGCAGTTTGCTTGGTATGCGGGGAACACTAATAGCCCTAATACCTCAGAAATACCGCTACATCACATGGGTCATGCCGATAGTGGTGAGTATATATACTTACGAACACAAATTCGCATGGGTAACAAAGGTGATCAGACAGTGGATATTAAGTGCAACAAATCCCATACTAAACCAGTAGCCTTTACTGTTAAGTTAGTAAAAATAATGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)