Phage RBP Database

Genbank accession

GENB_bf43effccf94 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

Seq2Symm

C3 confidence 1,000

C3	1,000
D3	0,001
C1	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MLDNLNQPRGSTAGILEPNRAPAVITRSVADLLLDGEAGLRKNFGAKGDGVSDDTAAFNDWWACLMDVNYKRRPAEEDESTVRFMLQKGPLLKLEHGTFVYSGKGLDIATSNAFVFNVVGESALSTKVLITGGYYLFDFANNPVHSLLGDMTIHGGLGAVRYRSKSRNASGMHIFKDIRVSRYSECAISHNSVDMPYFRVERGMFYGRTDMQTIGVCVSGLAAGGYIKDCVFSDNRYGIKLAVGDNGIERTGPATPFLIEGNDFYRTGNRAPKASYDVWVEPGSTAQNSGRSIKFSRNKFGQEFLVYPDCHILVADAYPTGSGAGLNGDRHHTEEQSSGFFSGARFDDNDVNSVNSGYSAPYIKSFTPNIGNLRIADSYDNGMPSRFIEFSGGILQSQVNNLTRTNVLDISHCVSLQKGVEPSLLSNLNDVIKVVDPLQLLAGHPQSTAIPTGNQHVDFTSVYAGPTSSIAVTGASRTAINNSYGGITEAAEITLSSPDGRAVITAPGGVAGRQHWIDFEVRRGATNPVRSVIVEVLDQSGVSLQLRRVILMDSALRWQKVVLPYVPNESGNIVIRFRSGTFVEGTATTFAVGNANIYQNPTPINTGHNSGLSMRWSTQHEVRGSRHVWVDSLGNFRSKNGQPTSESDGVIISANPSP

Physico‐chemical properties

protein length:	658 AA
molecular weight:	71220,82890 Da
isoelectric point:	6,57919
aromaticity:	0,08663
hydropathy:	-0,25684

Domain architecture

GENB_bf43effccf94

1 658 aa

STR 40–383 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334

GENB_bf43effccf94

1658 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2039
ATT

DC_2039 DC_0672

GENB_bf43effccf94

1658 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	40	383	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits

Proteins with similar domain architecture

Phage

Klebsiella phage MT09 [NCBI] · taxon 3425210

Viruses

Host No host information

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)