Protein

Experimentally validated
View in Explore
Genbank accession
NP_043564.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,74
Seq2Symm
C1 confidence 0,953
C1 0,953
C3 0,087
C2 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MDSTINGKTVHINNPLDLIGLGRREIEFNIPKTDYWEMFKETMQVPTMKRGGYKNLLKGGWVFVDPFNQGRDLWTREYFTTSGGTVWQTFGASGDIFDYGTYESGYYNFKCPNTENEEDYIIGNQLSFLQAGKTYTLQWDMKRTTSSIKGDIQNFIGAGAGDWTFIDTSKPFYVNGSLHSAGTDGYVSWNSFIDSEDTSWHRCTIVFTCKNPITDLSKRTIRWRAKKGSSWKVKNIMMFEGSEPLGTDFRLHDEEYYDWTFYEGKQGMREVSANFGFYYSEEYAFCSAFKVNIHKGFETRGFNPVTQEFECKSEVENFAQIVNPTIKYYQDIKQIPDNVNWNNTIIYNPKPNGIDYLQCRAKGNYMSLYKVRDDNYSSYVPKRWQATFFDSVPSSKWLYGGYCYTGTLQTYEIEN
Physico‐chemical
properties
protein length:415 AA
molecular weight: 48232,21550 Da
isoelectric point:5,57820
aromaticity:0,16867
hydropathy:-0,65566

Taxonomy

Phage
Lactococcus phage c2 [NCBI] · taxon 2681624
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Lactococcus cremoris [NCBI] · taxon 1359
cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Coding sequence (CDS)

Genbank protein accession
NP_043564.1 [NCBI]
Genbank nucleotide accession
NC_001706 [NCBI]
CDS location
range 20449 -> 21696
strand +
CDS
ATGGATAGTACAATAAATGGTAAAACGGTACATATAAATAACCCATTAGATCTTATAGGCTTAGGACGTAGGGAAATCGAGTTCAACATTCCTAAAACTGATTATTGGGAAATGTTCAAAGAAACTATGCAAGTACCTACAATGAAACGTGGAGGGTACAAAAACCTGCTTAAAGGTGGTTGGGTATTTGTTGACCCTTTTAATCAGGGTAGAGATTTGTGGACTAGAGAATATTTCACAACATCAGGCGGAACGGTATGGCAAACTTTTGGAGCTAGCGGAGATATTTTTGATTATGGTACTTATGAAAGTGGATATTATAATTTTAAGTGTCCTAATACTGAAAACGAAGAAGATTACATTATCGGAAATCAACTATCTTTTTTACAAGCAGGCAAAACTTACACTTTACAATGGGATATGAAGCGAACAACTTCTTCTATAAAAGGAGATATACAAAACTTCATAGGAGCAGGAGCAGGGGATTGGACTTTCATAGACACAAGTAAACCGTTTTACGTAAATGGTTCTTTGCATTCAGCAGGTACTGACGGTTACGTTAGTTGGAATAGTTTCATTGATTCAGAAGATACTTCATGGCATAGGTGTACAATCGTATTCACTTGTAAAAACCCTATAACTGACTTGAGTAAACGAACGATACGTTGGAGAGCTAAAAAAGGTAGCTCGTGGAAAGTAAAAAATATTATGATGTTCGAGGGTTCTGAACCATTGGGGACTGATTTTAGATTACATGATGAGGAATATTATGATTGGACTTTCTACGAGGGCAAACAAGGAATGCGAGAGGTGTCCGCTAACTTTGGTTTTTATTACAGCGAAGAGTATGCTTTTTGTTCAGCATTTAAGGTCAATATACATAAAGGGTTTGAAACAAGAGGCTTCAACCCAGTTACACAAGAGTTTGAATGTAAATCAGAAGTTGAGAACTTTGCACAAATTGTCAACCCTACAATCAAATACTATCAGGACATTAAACAAATACCTGATAACGTGAATTGGAATAATACTATCATATACAACCCTAAACCGAACGGAATAGATTACTTACAATGTAGAGCTAAAGGGAACTATATGAGTCTATATAAAGTCAGAGATGATAATTATAGTTCATACGTTCCTAAACGTTGGCAAGCTACATTTTTTGATTCAGTTCCTAGCAGTAAATGGTTATATGGCGGATATTGTTATACTGGTACATTACAAACGTACGAGATAGAAAACTAA

Genome Context

Tertiary structure

NP_043564.1
ESMFold2 structure
Source ESMFold2
pLDDT 48.9
Oligomeric state monomer
Download structure

Experimental validation

Experimentally validated

A wet-lab result is recorded for this protein, or for its sequence: a solved structure, an experimental GO annotation, a UniProt ECO:0000269 assertion, or a GenBank /experiment= qualifier.

Tier Source Assay Claim Reference
Experimentally validated GenBank
NP_043564.1
 experiment:unspecified virion structural protein – experimental evidence, no additional details recorded —
Validated by sequence identity GenBank
AAA92195.1
 experiment:unspecified minor structural protein – experimental evidence, no additional details recorded —

Rows marked “Validated by sequence identity” come from a different entry carrying the same sequence — the experiment was not performed on this protein.