Protein

View in Explore
Genbank accession
UJD05058.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,43
Seq2Symm
C3 confidence 0,993
C3 0,993
C1 0,030
D3 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MGFYAGRIGDKKVLSLTSGNNKDVNNHTNPGWDTIFHSDMPHVVVLETHERDLWDGGDWYRCTRMPDRIIQVLSADYDRVVLTEVEFEDGTRRFIYGTSLGVGAKAYNAYFSNTVGSQVSAGTMASMKTNVCASADLHMDISFYFEETPGTINEKLRDGTGCMYTWGVNSEWGDRGPGPPVGAPIRPNFETIIKAGWVLYRGAFSGNIAGSVSPPNRPLTIGADAMRHPWMRTTGVNSICLRGETLNRNIYGHMGPRYGKGSNPVGGPYAHNIQTESYQEVQYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNFRVPKRVRWYITNMKYNGQGFYAENVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIRVIATNVARFSGNPTVGNNGYAHFNQPLTRPDNGAEFGHGNISEMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSEATRPLRLVGGTGSADIGGNLRTSGNASHHLATLWLGVNNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNHFQKRVHQIMCLPVNMCVPFHFIRGTVTQCGVIPGNNAMQMKAMWAPTTTNSATQGDYAIIYWLIARADGSVEVWVNVEMSNIMNMRVILPEVRIAVQRLA
Physico‐chemical
properties
protein length:658 AA
molecular weight: 73247,44040 Da
isoelectric point:8,25951
aromaticity:0,10790
hydropathy:-0,42082

Domains

View on InterPro
Domain architecture
UJD05058.1
1 658 aa
RBD 1–658
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UJD05058.1
1 658 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0026
Central domain 11 209 200 0,4980
C-terminal 210 658 448 0,9280
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Klebsiella phage PWKp9S [NCBI] · taxon 2863276
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Klebsiella pneumoniae [NCBI] · taxon 573
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
UJD05058.1 [NCBI]
Genbank nucleotide accession
MZ634344 [NCBI]
CDS location
range 1258 -> 3234
strand +
CDS
ATGGGCTTTTATGCAGGAAGGATAGGCGACAAAAAAGTGTTGTCTCTTACCTCTGGCAACAATAAAGACGTTAATAACCACACTAATCCAGGTTGGGATACTATATTCCATAGCGATATGCCTCACGTTGTAGTTTTAGAAACTCACGAGAGAGACCTCTGGGATGGTGGTGATTGGTATCGTTGTACTAGAATGCCAGACAGGATTATTCAGGTACTGTCCGCAGACTACGACAGGGTTGTCTTAACTGAAGTTGAATTTGAGGATGGTACTAGACGTTTCATTTACGGTACTTCTCTAGGCGTTGGCGCTAAAGCGTATAACGCTTACTTTAGTAATACTGTCGGTTCCCAGGTTTCTGCAGGTACTATGGCTAGTATGAAGACTAACGTTTGTGCTTCTGCAGACTTACACATGGATATTAGTTTCTATTTCGAAGAGACGCCAGGTACTATTAACGAGAAGCTACGAGATGGTACTGGGTGTATGTACACCTGGGGCGTTAACTCAGAATGGGGAGACAGAGGGCCTGGGCCGCCGGTTGGAGCTCCTATACGTCCTAACTTTGAGACTATTATTAAAGCTGGATGGGTGCTCTATAGGGGGGCTTTTAGTGGCAATATAGCCGGTTCTGTGTCTCCGCCCAATAGACCACTTACTATTGGTGCTGATGCTATGCGCCACCCATGGATGCGTACTACTGGTGTTAACAGTATATGTTTGCGCGGTGAGACCCTCAATCGTAACATATACGGACACATGGGTCCTAGATACGGTAAGGGGTCTAATCCCGTTGGTGGTCCCTATGCTCATAACATCCAGACTGAGTCTTATCAGGAGGTTCAGTACAAAGCAGGCTTTTTCCGTGGTCCGCCCAATAATTTTATGGGGTGGGAAAACACAGATAACAACAATGCTGGTAGTGGTTGGGGTAACAATGCCATTTACCGTGACAATAACTTCCGTGTTCCTAAACGTGTTCGCTGGTATATTACTAATATGAAATACAATGGGCAGGGGTTCTACGCAGAGAACGTATTTGGCTCCCGCAACCAGGAGATTAAAATCAGCCCTAGAGAGTTCATTGTAAACGGTATAAACCTAATGAACACTGGGTGGAAGTTCATAAACCAGAACGATATAAACTACAGCCCAGGTAATAGGCCGGATATCCGAGTTATTGCGACCAATGTTGCTAGATTTAGTGGCAACCCTACTGTTGGTAATAATGGATATGCTCACTTCAATCAGCCTCTAACTCGACCAGATAATGGTGCGGAATTTGGGCACGGTAACATAAGTGAGATGCATGTAACCACTGTAGGAGTTTACAATTTTAGATCTGATGCGCAGTGGTATGTAAAATCCAACCCTCCGGAAATTGGAAACCAGTGGGGTCCAGTATGGTCCGAAGCAACTCGACCTCTTCGCCTAGTGGGCGGTACCGGCTCTGCTGATATTGGAGGGAACCTACGTACTAGCGGTAATGCTAGTCACCACCTGGCTACCTTGTGGTTAGGGGTTAATAACTCCCGAAATGGGGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATTGCTGCAGCAGGGATTGGATGTTATAACCCTCTAGAAGATCTTACCCAGTGGAGTGAGGTAGATAGTAGGCTAAGGATTTTCGGAAATCACTTCCAGAAACGTGTGCATCAAATCATGTGTCTTCCAGTTAACATGTGTGTGCCGTTCCACTTTATACGCGGGACCGTAACCCAGTGTGGGGTTATTCCTGGGAACAACGCAATGCAAATGAAGGCTATGTGGGCACCTACTACTACCAACTCTGCCACTCAGGGCGATTATGCCATTATCTATTGGCTGATAGCTAGGGCTGACGGTAGTGTTGAGGTTTGGGTTAACGTTGAGATGAGCAATATTATGAACATGCGCGTGATTCTTCCTGAGGTTAGGATTGCTGTGCAAAGGCTTGCCTAA

Genome Context

Tertiary structure

UJD05058.1
ESMFold structure
Source ESMFold
pLDDT 23.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank