Protein

View in Explore
Genbank accession
UJD05058.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,43
Protein sequence
MGFYAGRIGDKKVLSLTSGNNKDVNNHTNPGWDTIFHSDMPHVVVLETHERDLWDGGDWYRCTRMPDRIIQVLSADYDRVVLTEVEFEDGTRRFIYGTSLGVGAKAYNAYFSNTVGSQVSAGTMASMKTNVCASADLHMDISFYFEETPGTINEKLRDGTGCMYTWGVNSEWGDRGPGPPVGAPIRPNFETIIKAGWVLYRGAFSGNIAGSVSPPNRPLTIGADAMRHPWMRTTGVNSICLRGETLNRNIYGHMGPRYGKGSNPVGGPYAHNIQTESYQEVQYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNFRVPKRVRWYITNMKYNGQGFYAENVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIRVIATNVARFSGNPTVGNNGYAHFNQPLTRPDNGAEFGHGNISEMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSEATRPLRLVGGTGSADIGGNLRTSGNASHHLATLWLGVNNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNHFQKRVHQIMCLPVNMCVPFHFIRGTVTQCGVIPGNNAMQMKAMWAPTTTNSATQGDYAIIYWLIARADGSVEVWVNVEMSNIMNMRVILPEVRIAVQRLA
Physico‐chemical
properties
protein length:658 AA
molecular weight: 73247,44040 Da
isoelectric point:8,25951
aromaticity:0,10790
hydropathy:-0,42082

Domains

View on InterPro
Domain architecture
UJD05058.1
1 658 aa
RBD 1–658
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UJD05058.1
1 658 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0026
Central domain 11 209 200 0,4980
C-terminal 210 658 448 0,9280
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Klebsiella phage PWKp9S [NCBI] · taxon 2863276
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Klebsiella pneumoniae [NCBI] · taxon 573
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
UJD05058.1 [NCBI]
Genbank nucleotide accession
MZ634344 [NCBI]
CDS location
range 1258 -> 3234
strand +
CDS
ATGGGCTTTTATGCAGGAAGGATAGGCGACAAAAAAGTGTTGTCTCTTACCTCTGGCAACAATAAAGACGTTAATAACCACACTAATCCAGGTTGGGATACTATATTCCATAGCGATATGCCTCACGTTGTAGTTTTAGAAACTCACGAGAGAGACCTCTGGGATGGTGGTGATTGGTATCGTTGTACTAGAATGCCAGACAGGATTATTCAGGTACTGTCCGCAGACTACGACAGGGTTGTCTTAACTGAAGTTGAATTTGAGGATGGTACTAGACGTTTCATTTACGGTACTTCTCTAGGCGTTGGCGCTAAAGCGTATAACGCTTACTTTAGTAATACTGTCGGTTCCCAGGTTTCTGCAGGTACTATGGCTAGTATGAAGACTAACGTTTGTGCTTCTGCAGACTTACACATGGATATTAGTTTCTATTTCGAAGAGACGCCAGGTACTATTAACGAGAAGCTACGAGATGGTACTGGGTGTATGTACACCTGGGGCGTTAACTCAGAATGGGGAGACAGAGGGCCTGGGCCGCCGGTTGGAGCTCCTATACGTCCTAACTTTGAGACTATTATTAAAGCTGGATGGGTGCTCTATAGGGGGGCTTTTAGTGGCAATATAGCCGGTTCTGTGTCTCCGCCCAATAGACCACTTACTATTGGTGCTGATGCTATGCGCCACCCATGGATGCGTACTACTGGTGTTAACAGTATATGTTTGCGCGGTGAGACCCTCAATCGTAACATATACGGACACATGGGTCCTAGATACGGTAAGGGGTCTAATCCCGTTGGTGGTCCCTATGCTCATAACATCCAGACTGAGTCTTATCAGGAGGTTCAGTACAAAGCAGGCTTTTTCCGTGGTCCGCCCAATAATTTTATGGGGTGGGAAAACACAGATAACAACAATGCTGGTAGTGGTTGGGGTAACAATGCCATTTACCGTGACAATAACTTCCGTGTTCCTAAACGTGTTCGCTGGTATATTACTAATATGAAATACAATGGGCAGGGGTTCTACGCAGAGAACGTATTTGGCTCCCGCAACCAGGAGATTAAAATCAGCCCTAGAGAGTTCATTGTAAACGGTATAAACCTAATGAACACTGGGTGGAAGTTCATAAACCAGAACGATATAAACTACAGCCCAGGTAATAGGCCGGATATCCGAGTTATTGCGACCAATGTTGCTAGATTTAGTGGCAACCCTACTGTTGGTAATAATGGATATGCTCACTTCAATCAGCCTCTAACTCGACCAGATAATGGTGCGGAATTTGGGCACGGTAACATAAGTGAGATGCATGTAACCACTGTAGGAGTTTACAATTTTAGATCTGATGCGCAGTGGTATGTAAAATCCAACCCTCCGGAAATTGGAAACCAGTGGGGTCCAGTATGGTCCGAAGCAACTCGACCTCTTCGCCTAGTGGGCGGTACCGGCTCTGCTGATATTGGAGGGAACCTACGTACTAGCGGTAATGCTAGTCACCACCTGGCTACCTTGTGGTTAGGGGTTAATAACTCCCGAAATGGGGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATTGCTGCAGCAGGGATTGGATGTTATAACCCTCTAGAAGATCTTACCCAGTGGAGTGAGGTAGATAGTAGGCTAAGGATTTTCGGAAATCACTTCCAGAAACGTGTGCATCAAATCATGTGTCTTCCAGTTAACATGTGTGTGCCGTTCCACTTTATACGCGGGACCGTAACCCAGTGTGGGGTTATTCCTGGGAACAACGCAATGCAAATGAAGGCTATGTGGGCACCTACTACTACCAACTCTGCCACTCAGGGCGATTATGCCATTATCTATTGGCTGATAGCTAGGGCTGACGGTAGTGTTGAGGTTTGGGTTAACGTTGAGATGAGCAATATTATGAACATGCGCGTGATTCTTCCTGAGGTTAGGATTGCTGTGCAAAGGCTTGCCTAA

Genome Context

Tertiary structure

UJD05058.1
ESMFold structure
Source ESMFold
pLDDT 23.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank