Protein

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Genbank accession
UJD05058.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MGFYAGRIGDKKVLSLTSGNNKDVNNHTNPGWDTIFHSDMPHVVVLETHERDLWDGGDWYRCTRMPDRIIQVLSADYDRVVLTEVEFEDGTRRFIYGTSLGVGAKAYNAYFSNTVGSQVSAGTMASMKTNVCASADLHMDISFYFEETPGTINEKLRDGTGCMYTWGVNSEWGDRGPGPPVGAPIRPNFETIIKAGWVLYRGAFSGNIAGSVSPPNRPLTIGADAMRHPWMRTTGVNSICLRGETLNRNIYGHMGPRYGKGSNPVGGPYAHNIQTESYQEVQYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNFRVPKRVRWYITNMKYNGQGFYAENVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIRVIATNVARFSGNPTVGNNGYAHFNQPLTRPDNGAEFGHGNISEMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSEATRPLRLVGGTGSADIGGNLRTSGNASHHLATLWLGVNNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNHFQKRVHQIMCLPVNMCVPFHFIRGTVTQCGVIPGNNAMQMKAMWAPTTTNSATQGDYAIIYWLIARADGSVEVWVNVEMSNIMNMRVILPEVRIAVQRLA
Physico‐chemical
properties
protein length:658 AA
molecular weight: 73247,44040 Da
isoelectric point:8,25951
aromaticity:0,10790
hydropathy:-0,42082

Domains

Domains [InterPro]
IPR059609
RBD
1–658
IPR059609
UJD05058.1
1 658
Architecture
RBD
RBD 1-658
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD05058.1
1 658
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0026
Central domain 11 209 200 0,4980
C-terminal 210 658 448 0,9280
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-658

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp9S
[NCBI] 		2863276 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD05058.1 [NCBI]
Genbank nucleotide accession
MZ634344 [NCBI]
CDS location
range 1258 -> 3234
strand +
CDS
ATGGGCTTTTATGCAGGAAGGATAGGCGACAAAAAAGTGTTGTCTCTTACCTCTGGCAACAATAAAGACGTTAATAACCACACTAATCCAGGTTGGGATACTATATTCCATAGCGATATGCCTCACGTTGTAGTTTTAGAAACTCACGAGAGAGACCTCTGGGATGGTGGTGATTGGTATCGTTGTACTAGAATGCCAGACAGGATTATTCAGGTACTGTCCGCAGACTACGACAGGGTTGTCTTAACTGAAGTTGAATTTGAGGATGGTACTAGACGTTTCATTTACGGTACTTCTCTAGGCGTTGGCGCTAAAGCGTATAACGCTTACTTTAGTAATACTGTCGGTTCCCAGGTTTCTGCAGGTACTATGGCTAGTATGAAGACTAACGTTTGTGCTTCTGCAGACTTACACATGGATATTAGTTTCTATTTCGAAGAGACGCCAGGTACTATTAACGAGAAGCTACGAGATGGTACTGGGTGTATGTACACCTGGGGCGTTAACTCAGAATGGGGAGACAGAGGGCCTGGGCCGCCGGTTGGAGCTCCTATACGTCCTAACTTTGAGACTATTATTAAAGCTGGATGGGTGCTCTATAGGGGGGCTTTTAGTGGCAATATAGCCGGTTCTGTGTCTCCGCCCAATAGACCACTTACTATTGGTGCTGATGCTATGCGCCACCCATGGATGCGTACTACTGGTGTTAACAGTATATGTTTGCGCGGTGAGACCCTCAATCGTAACATATACGGACACATGGGTCCTAGATACGGTAAGGGGTCTAATCCCGTTGGTGGTCCCTATGCTCATAACATCCAGACTGAGTCTTATCAGGAGGTTCAGTACAAAGCAGGCTTTTTCCGTGGTCCGCCCAATAATTTTATGGGGTGGGAAAACACAGATAACAACAATGCTGGTAGTGGTTGGGGTAACAATGCCATTTACCGTGACAATAACTTCCGTGTTCCTAAACGTGTTCGCTGGTATATTACTAATATGAAATACAATGGGCAGGGGTTCTACGCAGAGAACGTATTTGGCTCCCGCAACCAGGAGATTAAAATCAGCCCTAGAGAGTTCATTGTAAACGGTATAAACCTAATGAACACTGGGTGGAAGTTCATAAACCAGAACGATATAAACTACAGCCCAGGTAATAGGCCGGATATCCGAGTTATTGCGACCAATGTTGCTAGATTTAGTGGCAACCCTACTGTTGGTAATAATGGATATGCTCACTTCAATCAGCCTCTAACTCGACCAGATAATGGTGCGGAATTTGGGCACGGTAACATAAGTGAGATGCATGTAACCACTGTAGGAGTTTACAATTTTAGATCTGATGCGCAGTGGTATGTAAAATCCAACCCTCCGGAAATTGGAAACCAGTGGGGTCCAGTATGGTCCGAAGCAACTCGACCTCTTCGCCTAGTGGGCGGTACCGGCTCTGCTGATATTGGAGGGAACCTACGTACTAGCGGTAATGCTAGTCACCACCTGGCTACCTTGTGGTTAGGGGTTAATAACTCCCGAAATGGGGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATTGCTGCAGCAGGGATTGGATGTTATAACCCTCTAGAAGATCTTACCCAGTGGAGTGAGGTAGATAGTAGGCTAAGGATTTTCGGAAATCACTTCCAGAAACGTGTGCATCAAATCATGTGTCTTCCAGTTAACATGTGTGTGCCGTTCCACTTTATACGCGGGACCGTAACCCAGTGTGGGGTTATTCCTGGGAACAACGCAATGCAAATGAAGGCTATGTGGGCACCTACTACTACCAACTCTGCCACTCAGGGCGATTATGCCATTATCTATTGGCTGATAGCTAGGGCTGACGGTAGTGTTGAGGTTTGGGTTAACGTTGAGATGAGCAATATTATGAACATGCGCGTGATTCTTCCTGAGGTTAGGATTGCTGTGCAAAGGCTTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
21e91944e1bce9d62978fdda6b33214e6549c578da6c173f9d70fc5bbcd952c2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2333
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank