Protein

View in Explore
Genbank accession
YP_009845552.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVATETYPVGALVKVNADNMLYRCLVQNINMAPSANPTQWRPVLDLTAATAAARQVGKASGNIIQVGAFGLGGNAEVVTNANSITNDGIYQLPASGTGGPTNGVDTEILHINWDTQNASQWARTKGKRVIAMREKVNNTWGGWSYSYGPDNKPTASELGINQDFIPMDGSDSIRGNLGTIGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVITAARWGSVPMTHIQHILVSGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGDKKELRGGTYWSAPLQYYIDGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47290,41250 Da
isoelectric point:6,31631
aromaticity:0,07883
hydropathy:-0,16779

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009845552.1
1 444 aa
Domain Start End Length (AA) Confidence
N-terminal 1 192 192 0,7137
Central domain 193 391 200 0,0623
C-terminal 392 444 52 0,9994
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage SE13 [NCBI] · taxon 2575325
Uroviricota Caudoviricetes Rosemountvirus
Host No host information

Coding sequence (CDS)

Genbank protein accession
YP_009845552.1 [NCBI]
Genbank nucleotide accession
NC_048763.1 [NCBI]
CDS location
range 33317 -> 34651
strand +
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCCGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTAGCTCGAGGCTGGGGTGCTACCCTTGGCTACTCGGAAGGTATTCCTCCGATGGAGTGGTTCAACTTTATTGGTAACCGTACTGACAAAGGTATCCACTACATCCTACAGCAGGGTGTTGACGTATGGGTAGCAACTGAGACTTACCCGGTTGGGGCACTGGTTAAAGTTAACGCAGACAATATGCTGTACCGTTGTCTGGTGCAAAACATTAACATGGCACCATCTGCTAACCCTACGCAGTGGCGTCCTGTGCTTGACCTGACAGCTGCAACTGCTGCAGCACGTCAGGTTGGTAAAGCTTCAGGTAACATAATCCAGGTCGGTGCATTTGGTTTAGGTGGTAATGCTGAAGTTGTTACTAATGCTAACAGCATTACAAACGACGGTATTTATCAGCTTCCTGCGTCAGGTACCGGCGGACCTACTAACGGCGTTGATACTGAGATTCTGCACATCAACTGGGATACGCAGAATGCTTCGCAGTGGGCACGAACCAAAGGCAAGCGTGTAATTGCTATGCGCGAAAAGGTTAACAATACCTGGGGTGGCTGGTCATACTCTTACGGGCCTGACAATAAACCTACGGCCTCTGAGCTGGGTATTAATCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGCGGCAACTTAGGTACTATCGGCTGGTTGCATATTGCACGTACTACTTCCGACTTGCTACGTGCTGCTAACTCAGCCGGTGTAGGTACTGTTGAGTATTCTGGTAACATTGCAGGCGGTACTGCTGTTCAGGAGTTACTGACTTCGGTTTCTGTTGCGGCTAACAGTAATGTTATCACTGCTGCACGCTGGGGTTCTGTACCTATGACTCATATCCAGCACATTCTTGTGTCTGGTGGTGCTACCCAGATTAACATGGCAGTATGTCGCCCTGGTGGTATTGCTGATCGTCGTACAGTAGCTTTGCAGGTAGATGGTCTTAACAGCCGAGTAACTACCACAAACAGCTTTATTTTATGCGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTTGGTGCTCGTATTGCTGCTGGCGTATCCGAGTCAACGTTCTACCCTGGCCACGTAATGACAGGCTGGCGCTTCGGTGATAAGAAAGAGCTGCGTGGTGGCACATACTGGTCAGCGCCGTTACAGTACTATATCGACGGCACTTGGATTAATGTAAGCAACGTATCATAA

Genome Context

Tertiary structure

YP_009845552.1
ESMFold structure
Source ESMFold
pLDDT 66.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Wang,S., Delaquis,P., Tremblay,D., Moineau,S., Levesque,R. and Goodridge,L. 2019-09-14 — GenBank