Protein

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Genbank accession
ALF02003.1 [GenBank]
Protein name
tail assembly protein
RBP type
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MAIIKSEYLLPNYDPEEVGMKGEKGDDGKTSYVHIAYSNSSDGGVDFSTTDPTNRAYTGYYTDFEMIDSTDPSKYEWQRTKGDSGKDGVAGKDGVGLQSTSTTYAKHTNANTPPATGWQSQVPTVPAGQYLWTKTVWTYTDNSSETGYSVARMGADGDRGQDGIAGKDGVGIKTTVIEYAVNTSGTVRPTSGWSTTIPTTPQGQYLWTRTTWTYTDNTTEQGYSVARQGSNGQNGTNGADGDDGVGISTTIIEYNKSTNSTTPPSTGWTSTIPSISGGQYLWTRVTLNYTDGKKAESYTVARQGEDGADGQLFTGETEPKDFNEGDIWYKVVSGKVTGVYEAKGGAWVEIPFESSVIAETIIGKTIQASHLTGSTIDGGKISGAEFLNEYINVTSGVNQVTDGKLGIKDGILQAGSTYYLTNSAGERLYKFATTEADIHQGTVNLRQRLYDETGKQTSESTTSVSGGLINLSLSDASGNYHGVLDAKALTKTPWINLTLGSAFETKENNPCMYKIQHNLDGTRTVLFRGQFGLKSGDMVAGRDYYPFQVGSGTSADGETTLPAAIKPRVTEFAYGAIGVPSGPNPGGRLGITRTPKIVFSPGANATYCGISSLSYIIE
Physico‐chemical
properties
protein length:618 AA
molecular weight: 65978,52530 Da
isoelectric point:4,95928
aromaticity:0,09547
hydropathy:-0,53317

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage IME-EFm5
[NCBI] 		1718158 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecium
[NCBI] 		1352 Bacteria > Firmicutes > Bacilli > Lactobacillales > Enterococcaceae > Enterococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALF02003.1 [NCBI]
Genbank nucleotide accession
KT588072 [NCBI]
CDS location
range 15933 -> 17789
strand -
CDS
ATGGCAATAATTAAATCAGAATACCTACTTCCAAATTATGACCCAGAAGAGGTGGGAATGAAGGGCGAAAAAGGTGATGATGGGAAAACCAGTTACGTACACATTGCCTATTCTAATAGCTCAGATGGTGGGGTAGATTTTAGTACGACTGACCCAACCAACAGGGCTTACACTGGTTACTATACAGATTTTGAAATGATAGATTCAACAGACCCTAGTAAATATGAATGGCAACGTACAAAAGGTGACTCTGGCAAGGATGGAGTAGCTGGTAAAGATGGAGTAGGTTTACAATCAACCAGTACCACATATGCTAAACATACTAATGCAAATACACCACCAGCTACAGGGTGGCAATCTCAAGTACCAACTGTTCCAGCTGGTCAATACCTATGGACTAAAACAGTATGGACTTATACAGACAATTCAAGCGAAACAGGTTACTCAGTAGCTAGAATGGGAGCGGATGGCGATCGTGGACAAGACGGTATAGCTGGGAAAGATGGAGTAGGCATTAAAACCACAGTGATTGAATATGCTGTGAATACTAGTGGCACAGTTAGACCTACAAGCGGTTGGTCTACAACCATACCTACCACCCCACAAGGTCAATACCTATGGACACGTACCACGTGGACGTACACTGATAATACAACTGAACAAGGTTACTCAGTAGCTAGACAAGGTAGCAACGGACAAAACGGAACAAACGGAGCTGACGGCGATGATGGTGTAGGAATATCTACAACAATAATTGAGTATAATAAGTCAACTAACTCAACAACACCTCCGTCTACTGGATGGACTAGCACTATCCCTTCTATAAGCGGAGGTCAATATCTATGGACACGTGTCACATTGAACTATACTGATGGTAAAAAAGCTGAATCATACACCGTAGCTAGACAAGGTGAAGATGGTGCAGATGGACAACTATTCACTGGTGAAACAGAGCCAAAAGACTTTAATGAAGGTGATATCTGGTATAAAGTGGTTTCTGGTAAAGTAACTGGTGTATATGAAGCTAAAGGTGGTGCGTGGGTGGAAATACCGTTTGAAAGTTCTGTAATTGCTGAAACCATCATTGGTAAAACGATTCAAGCTTCACACCTTACAGGTAGTACTATTGACGGTGGTAAAATCAGTGGTGCTGAGTTTCTGAATGAGTATATTAATGTTACTAGTGGTGTGAATCAAGTTACGGATGGTAAACTAGGTATTAAGGATGGTATTTTACAAGCTGGATCAACCTATTATTTAACAAACAGTGCTGGTGAAAGACTGTATAAGTTTGCAACTACAGAAGCAGATATTCACCAGGGAACAGTTAATCTAAGGCAAAGATTATATGATGAAACAGGCAAACAAACATCAGAATCTACTACAAGCGTTAGTGGTGGCTTAATTAACTTATCATTAAGTGATGCTTCTGGTAACTATCATGGCGTACTAGATGCTAAGGCGCTAACTAAGACCCCATGGATTAACTTGACATTAGGTTCAGCATTTGAAACTAAGGAGAATAACCCATGTATGTATAAGATTCAACATAATCTAGATGGGACACGAACAGTTCTATTTAGAGGTCAATTCGGATTGAAAAGTGGTGATATGGTAGCGGGTAGGGATTATTATCCATTTCAAGTTGGCTCAGGAACATCTGCTGATGGAGAAACAACCCTCCCAGCAGCTATCAAGCCAAGAGTAACTGAATTCGCTTACGGTGCGATTGGCGTGCCTAGTGGGCCAAATCCTGGTGGTCGTCTAGGTATAACACGTACTCCTAAAATTGTATTTTCACCAGGTGCAAACGCTACCTACTGTGGTATAAGTTCTCTATCATATATTATTGAATAA

Tertiary structure

PDB ID
d9de8470cfe4c38a832fec3b18adb763ae902e7d69c13ea1b43f11c47fcf4364
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7693
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of novel bacteriophage IME-EFm5 Gong,P., Han,W. and Gu,J. 2016-05 — GenBank